MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 2 028 224–2 188 224 bp (160 000 bp)
+ strand − strand Rv1776c (Rv1776c) — family_assigned: TetR/AcrR family transcriptional regulator Rv1778c (Rv1778c) — dark: hypothetical protein Rv1779c (Rv1779c) — dark: DUF4407 domain-containing protein Rv1780 (Rv1780) — family_assigned: hypothetical protein malQ (Rv1781c) — requalified: 4-alpha-glucanotransferase eccB5 (Rv1782) — family_assigned: type VII secretion system ESX-5 subunit EccB5 cyp143 (Rv1785c) — requalified: cytochrome P450 Rv1786 (Rv1786) — requalified: ferredoxin esxJ (Rv1038c) — requalified: type VII secretion system ESX-5 protein EsxJ Rv1794 (Rv1794) — family_assigned: ESX secretion-associated protein EspG eccD5 (Rv1795) — family_assigned: type VII secretion system ESX-5 subunit EccD5 mycP5 (Rv1796) — requalified: type VII secretion system ESX-5 serine protease mycosin MycP eccE5 (Rv1797) — family_assigned: type VII secretion system ESX-5 subunit EccE5 eccA5 (Rv1798) — family_assigned: type VII secretion system ESX-5 AAA family ATPase EccA5 lppT (Rv1799) — dark: hypothetical protein Rv1804c (Rv1804c) — requalified: DUF732 domain-containing protein mgtC (Rv1811) — family_assigned: MgtC/SapB family protein Rv1812c (Rv1812c) — requalified: NAD(P)/FAD-dependent oxidoreductase Rv1813c (Rv1813c) — family_assigned: DUF4189 domain-containing protein Rv1815 (Rv1815) — family_assigned: hypothetical protein Rv1817 (Rv1817) — family_assigned: FAD-binding protein bacA (Rv1819c) — family_assigned: vitamin B12 ABC transporter ATP-binding protein BacA ilvG (Rv1820) — requalified: acetolactate synthase pgsA2 (Rv1822) — family_assigned: CDP-alcohol phosphatidyltransferase family protein Rv1823 (Rv1823) — family_assigned: DUF881 domain-containing protein Rv1824 (Rv1824) — family_assigned: small basic family protein Rv1825 (Rv1825) — family_assigned: DUF881 domain-containing protein gcvH (Rv1826) — requalified: glycine cleavage system protein GcvH garA (Rv1827) — requalified: glycogen accumulation regulator GarA Rv1828 (Rv1828) — family_assigned: MerR family transcriptional regulator gcvB (Rv1832) — requalified: aminomethyl-transferring glycine dehydrogenase Rv1833c (Rv1833c) — requalified: haloalkane dehalogenase lipZ (Rv1834) — family_assigned: alpha/beta hydrolase Rv1835c (Rv1835c) — family_assigned: CocE/NonD family hydrolase Rv1836c (Rv1836c) — family_assigned: substrate-binding domain-containing protein glcB (Rv1837c) — requalified: malate synthase G vapC13 (Rv1838c) — family_assigned: type II toxin-antitoxin system VapC family toxin vapB13 (Rv1839c) — requalified: antitoxin Rv1841c (Rv1841c) — family_assigned: hemolysin family protein Rv1842c (Rv1842c) — family_assigned: hemolysin family protein guaB1 (Rv1843c) — family_assigned: GuaB1 family IMP dehydrogenase-related protein blaR (Rv1845c) — family_assigned: M56 family metallopeptidase blaI (Rv1846c) — requalified: transcriptional repressor BlaI Rv1847 (Rv1847) — family_assigned: PaaI family thioesterase ureA (Rv1848) — family_assigned: urease subunit gamma ureB (Rv1849) — family_assigned: urease subunit beta ureC (Rv1850) — family_assigned: urease subunit alpha ureF (Rv1851) — requalified: urease accessory protein UreF ureG (Rv1852) — requalified: urease accessory protein UreG ndh (Rv1854c) — requalified: NAD(P)/FAD-dependent oxidoreductase Rv1855c (Rv1855c) — requalified: LLM class F420-dependent oxidoreductase Rv1856c (Rv1856c) — family_assigned: SDR family oxidoreductase modA (Rv1857) — family_assigned: molybdate ABC transporter substrate-binding protein modB (Rv1858) — family_assigned: ABC transporter permease modC (Rv1859) — family_assigned: sulfate/molybdate ABC transporter ATP-binding protein Rv1861 (Rv1861) — family_assigned: GlsB/YeaQ/YmgE family stress response membrane protein adhA (Rv1862) — family_assigned: zinc-binding alcohol dehydrogenase family protein Rv1865c (Rv1865c) — family_assigned: SDR family oxidoreductase Rv1867 (Rv1867) — requalified: acetyl-CoA acetyltransferase Rv1868 (Rv1868) — family_assigned: NAD(P)H-binding protein Rv1869c (Rv1869c) — requalified: FAD-dependent oxidoreductase Rv1871c (Rv1871c) — family_assigned: nitroreductase family deazaflavin-dependent oxidoreductase lldD2 (Rv1872c) — requalified: quinone-dependent L-lactate dehydrogenase Rv1873 (Rv1873) — family_assigned: DUF1810 domain-containing protein Rv1875 (Rv1875) — requalified: PPOX class F420-dependent oxidoreductase Rv1877 (Rv1877) — family_assigned: MDR family MFS transporter glnA3 (Rv1878) — family_assigned: glutamine synthetase family protein Rv1879 (Rv1879) — family_assigned: amidohydrolase family protein cyp140 (Rv1880c) — requalified: cytochrome P450 lppE (Rv1881c) — requalified: lipoprotein LpqH Rv1882c (Rv1882c) — family_assigned: SDR family oxidoreductase Rv1883c (Rv1883c) — family_assigned: SRPBCC family protein rpfC (Rv1884c) — requalified: resuscitation-promoting factor RpfC Rv1885c (Rv1885c) — requalified: chorismate mutase fbpB (Rv1886c) — requalified: diacylglycerol acyltransferase/mycolyltransferase Ag85B Rv1887 (Rv1887) — family_assigned: hypothetical protein Rv1891 (Rv1891) — dark: hypothetical protein Rv1892 (Rv1892) — family_assigned: hypothetical protein Rv1893 (Rv1893) — family_assigned: hypothetical protein Rv1894c (Rv1894c) — family_assigned: nitronate monooxygenase family protein Rv1896c (Rv1896c) — requalified: class I SAM-dependent methyltransferase dtd (Rv1897c) — requalified: D-aminoacyl-tRNA deacylase Rv1898 (Rv1898) — family_assigned: MTH1187 family thiamine-binding protein lipJ (Rv1900c) — family_assigned: adenylate/guanylate cyclase domain-containing protein cinA (Rv1901) — requalified: competence/damage-inducible protein A nanT (Rv1902c) — family_assigned: sialate:H+ symport family MFS transporter Rv1903 (Rv1903) — family_assigned: phage holin family protein Rv1904 (Rv1904) — requalified: anti-sigma factor antagonist aao (Rv1905c) — requalified: FAD-dependent oxidoreductase Rv1906c (Rv1906c) — family_assigned: hypothetical protein katG (Rv1908c) — requalified: catalase/peroxidase HPI furA (Rv1909c) — family_assigned: Fur family transcriptional regulator Rv1910c (Rv1910c) — family_assigned: YbhB/YbcL family Raf kinase inhibitor-like protein lppC (Rv1911c) — family_assigned: YbhB/YbcL family Raf kinase inhibitor-like protein fadB5 (Rv1912c) — family_assigned: medium chain dehydrogenase/reductase family protein Rv1913 (Rv1913) — requalified: MBL fold metallo-hydrolase Rv1914c (Rv1914c) — dark: hypothetical protein 2 040 kb 2 067 kb 2 094 kb 2 120 kb 2 146 kb 2 173 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.