MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 1 221 214–1 381 214 bp (160 000 bp)
+ strand − strand Rv1086 (Rv1086) — family_assigned: undecaprenyl diphosphate synthase family protein desA2 (Rv1094) — requalified: acyl-ACP desaturase phoH2 (Rv1095) — family_assigned: PhoH family protein Rv1096 (Rv1096) — family_assigned: polysaccharide deacetylase family protein Rv1097c (Rv1097c) — family_assigned: hypothetical protein fum (Rv1098c) — requalified: class II fumarate hydratase glpX (Rv1099c) — requalified: class II fructose-bisphosphatase Rv1101c (Rv1101c) — family_assigned: AI-2E family transporter mazF3 (Rv1102c) — requalified: type II toxin-antitoxin system toxin endoribonuclease MazF3 Rv1106c (Rv1106c) — requalified: 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase xseB (Rv1107c) — family_assigned: exodeoxyribonuclease VII small subunit xseA (Rv1108c) — family_assigned: exodeoxyribonuclease VII large subunit Rv1109c (Rv1109c) — requalified: lipid droplet-associated protein Rv1111c (Rv1111c) — family_assigned: DUF6542 domain-containing protein ychF (Rv1112) — requalified: redox-regulated ATPase YchF vapB32 (Rv1113) — family_assigned: type II toxin-antitoxin system VapB family antitoxin vapC32 (Rv1114) — family_assigned: type II toxin-antitoxin system VapC family toxin Rv1115 (Rv1115) — family_assigned: hypothetical protein Rv1116 (Rv1116) — dark: hypothetical protein Rv1117 (Rv1117) — family_assigned: putative quinol monooxygenase gnd2 (Rv1122) — requalified: decarboxylating 6-phosphogluconate dehydrogenase Rv1125 (Rv1125) — family_assigned: WS/DGAT domain-containing protein Rv1126c (Rv1126c) — family_assigned: MarR family transcriptional regulator ppdK (Rv1127c) — requalified: pyruvate%2C phosphate dikinase Rv1129c (Rv1129c) — family_assigned: short-chain fatty acyl-CoA regulator family protein prpC (Rv1131) — requalified: 2-methylcitrate synthase Rv1132 (Rv1132) — family_assigned: DUF3556 domain-containing protein metE (Rv1133c) — requalified: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyl Rv1134 (Rv1134) — family_assigned: hypothetical protein Rv1138c (Rv1138c) — requalified: NAD(P)/FAD-dependent oxidoreductase Rv1139c (Rv1139c) — family_assigned: isoprenylcysteine carboxyl methyltransferase family protein echA11 (Rv1141c) — requalified: enoyl-CoA hydratase echA10 (Rv1142c) — requalified: enoyl-CoA hydratase mcr (Rv1143) — requalified: alpha-methylacyl-CoA racemase Rv1144 (Rv1144) — requalified: 3-hydroxyacyl-CoA dehydrogenase Rv1147 (Rv1147) — family_assigned: methyltransferase domain-containing protein cobB (Rv1151c) — requalified: NAD-dependent protein deacylase Rv1152 (Rv1152) — family_assigned: GntR family transcriptional regulator omt (Rv1153c) — requalified: class I SAM-dependent methyltransferase Rv1155 (Rv1155) — requalified: PPOX class F420-dependent oxidoreductase Rv1156 (Rv1156) — requalified: HhH-GPD-type base excision DNA repair protein Rv1157c (Rv1157c) — dark: hypothetical protein Rv1158c (Rv1158c) — dark: hypothetical protein pimE (Rv1159) — requalified: mannosyltransferase mutT2 (Rv1160) — requalified: 8-oxo-dGTP diphosphatase MutT narG (Rv1161) — family_assigned: nitrate reductase subunit alpha narI (Rv1164) — family_assigned: respiratory nitrate reductase subunit gamma typA (Rv1165) — requalified: translational GTPase TypA lpqW (Rv1166) — requalified: lipoarabinomannan biosynthesis protein LpqW Rv1167c (Rv1167c) — family_assigned: TetR/AcrR family transcriptional regulator mshB (Rv1170) — requalified: N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyran Rv1171 (Rv1171) — family_assigned: hypothetical protein fbiC (Rv1173) — requalified: bifunctional FO biosynthesis protein CofGH TB8.4 (Rv1174c) — requalified: hemophore-related protein fadH (Rv1175c) — requalified: NADPH-dependent 2%2C4-dienoyl-CoA reductase Rv1176c (Rv1176c) — family_assigned: PadR family transcriptional regulator fdxC (Rv1177) — family_assigned: ferredoxin family protein dapC (Rv1178) — requalified: succinyldiaminopimelate transaminase Rv1179c (Rv1179c) — family_assigned: DEAD/DEAH box helicase family protein papA3 (Rv1182) — requalified: acyltransferase PapA3 mmpL10 (Rv1183) — requalified: RND transporter MmpL10 chp2 (Rv1184c) — requalified: diacyltrehalose acyltransferase Chp2 fadD21 (Rv1185c) — requalified: fatty-acid--AMP ligase FAAL21/FadD21 Rv1186c (Rv1186c) — family_assigned: PucR family transcriptional regulator rocA (Rv1187) — requalified: L-glutamate gamma-semialdehyde dehydrogenase Rv1188 (Rv1188) — requalified: proline dehydrogenase sigI (Rv1189) — requalified: RNA polymerase sigma factor SigI Rv1190 (Rv1190) — requalified: alpha/beta fold hydrolase Rv1191 (Rv1191) — family_assigned: alpha/beta hydrolase Rv1192 (Rv1192) — family_assigned: alpha/beta hydrolase fadD36 (Rv1193) — requalified: acyl-CoA synthetase Rv1194c (Rv1194c) — family_assigned: PucR family transcriptional regulator esxK (Rv1197) — requalified: type VII secretion system ESX-5 protein EsxJ esxL (Rv1198) — requalified: type VII secretion system ESX-5 protein EsxL Rv1200 (Rv1200) — family_assigned: MHS family MFS transporter dapD (Rv1201c) — requalified: 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succi Rv1205 (Rv1205) — family_assigned: TIGR00730 family Rossman fold protein fadD6 (Rv1206) — requalified: long-chain-acyl-CoA synthetase FadD6 folP2 (Rv1207) — requalified: dihydropteroate synthase gpgS (Rv1208) — requalified: glucosyl-3-phosphoglycerate synthase Rv1209 (Rv1209) — family_assigned: DivIVA domain-containing protein tagA (Rv1210) — requalified: DNA-3-methyladenine glycosylase I glgA (Rv1212c) — requalified: glycogen synthase Rv1215c (Rv1215c) — family_assigned: CocE/NonD family hydrolase Rv1216c (Rv1216c) — family_assigned: isoprenylcysteine carboxylmethyltransferase family protein Rv1217c (Rv1217c) — family_assigned: multidrug efflux ABC transporter permease Rv1218c (Rv1218c) — family_assigned: multidrug efflux ABC transporter ATP-binding protein raaS (Rv1219c) — family_assigned: transcriptional regulator RaaS sigE (Rv1221) — requalified: RNA polymerase sigma factor SigE rseA (Rv1222) — requalified: anti-sigma E factor RseA tatB (Rv1224) — requalified: Sec-independent protein translocase protein TatB Rv1225c (Rv1225c) — family_assigned: HAD-IIA family hydrolase Rv1226c (Rv1226c) — family_assigned: PH domain-containing protein Rv1227c (Rv1227c) — family_assigned: PH domain-containing protein lpqX (Rv1228) — dark: hypothetical protein mrp (Rv1229c) — family_assigned: Mrp/NBP35 family ATP-binding protein 1 246 kb 1 272 kb 1 298 kb 1 325 kb 1 352 kb 1 378 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.