MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 3 294 272–3 454 272 bp (160 000 bp)
+ strand − strand drrB (Rv2937) — family_assigned: daunorubicin ABC transporter permease DrrB drrC (Rv2938) — family_assigned: ABC transporter permease papA5 (Rv2939) — requalified: phthiocerol/phthiodiolone dimycocerosyl transferase mas (Rv2940c) — requalified: mycocerosate synthase mas fadD28 (Rv2941) — requalified: fatty-acid--AMP ligase FAAL28/FadD28 mmpL7 (Rv2942) — requalified: phthiocerol dimycocerosate RND transporter MmpL7 lppX (Rv2945c) — requalified: LppX_LprAFG lipoprotein fadD22 (Rv2948c) — requalified: p-hydroxybenzoic acid--AMP ligase FadD22 Rv2949c (Rv2949c) — family_assigned: chorismate pyruvate-lyase family protein Rv2951c (Rv2951c) — requalified: phthiodiolone/phenolphthiodiolone dimycocerosates ketoreduct Rv2952 (Rv2952) — requalified: phthiotriol/phenolphthiotriol dimycocerosates methyltransfer Rv2953 (Rv2953) — requalified: trans-acting enoyl reductase Rv2954c (Rv2954c) — requalified: [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rham Rv2955c (Rv2955c) — requalified: [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyran Rv2956 (Rv2956) — requalified: [alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3) Rv2957 (Rv2957) — requalified: PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c (Rv2958c) — requalified: PGL/p-HBAD biosynthesis glycosyltransferase Rv2959c (Rv2959c) — requalified: rhamnosyl O-methyltransferase Rv2960c (Rv2960c) — dark: hypothetical protein Rv2962c (Rv2962c) — requalified: PGL/p-HBAD biosynthesis rhamnosyltransferase Rv2963 (Rv2963) — requalified: permease purU (Rv2964) — requalified: formyltetrahydrofolate deformylase kdtB (Rv2965c) — requalified: pantetheine-phosphate adenylyltransferase rsmD (Rv2966c) — requalified: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD pca (Rv2967c) — requalified: pyruvate carboxylase Rv2968c (Rv2968c) — family_assigned: vitamin K epoxide reductase family protein Rv2969c (Rv2969c) — requalified: mycothiol-dependent reductase lipN (Rv2970c) — requalified: lipase/esterase LipN Rv2971 (Rv2971) — requalified: aldo/keto reductase Rv2972c (Rv2972c) — family_assigned: HNH endonuclease family protein recG (Rv2973c) — requalified: ATP-dependent DNA helicase RecG ung (Rv2976c) — requalified: uracil-DNA glycosylase thiL (Rv2977c) — requalified: thiamine-phosphate kinase tnpB (Rv2978c) — family_assigned: IS607 family element RNA-guided endonuclease TnpB Rv2979c (Rv2979c) — family_assigned: IS607 family transposase Rv2980 (Rv2980) — dark: DUF3515 domain-containing protein ddlA (Rv2981c) — requalified: D-alanine--D-alanine ligase DdlA gpdA2 (Rv2982c) — requalified: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase cofC (Rv2983) — requalified: 2-phospho-L-lactate guanylyltransferase ppk1 (Rv2984) — requalified: RNA degradosome polyphosphate kinase mutT1 (Rv2985) — requalified: NUDIX hydrolase hupB (Rv2986c) — family_assigned: DNA-binding protein HupB leuD (Rv2987c) — family_assigned: 3-isopropylmalate dehydratase small subunit leuC (Rv2988c) — family_assigned: 3-isopropylmalate dehydratase large subunit Rv2989 (Rv2989) — family_assigned: IclR family transcriptional regulator Rv2990c (Rv2990c) — requalified: class I SAM-dependent methyltransferase Rv2991 (Rv2991) — requalified: PPOX class F420-dependent oxidoreductase leuB (Rv2995c) — requalified: 3-isopropylmalate dehydrogenase Rv2997 (Rv2997) — requalified: NAD(P)/FAD-dependent oxidoreductase Rv2998 (Rv2998) — dark: hypothetical protein lppY (Rv2999) — family_assigned: DUF1259 domain-containing protein Rv3000 (Rv3000) — family_assigned: ABC transporter permease ilvC (Rv3001c) — requalified: ketol-acid reductoisomerase ilvN (Rv3002c) — family_assigned: acetolactate synthase small subunit Rv3005c (Rv3005c) — family_assigned: DoxX family protein lppZ (Rv3006) — family_assigned: sorbosone dehydrogenase family protein Rv3007c (Rv3007c) — family_assigned: flavin reductase family protein Rv3008 (Rv3008) — family_assigned: MgtC/SapB family protein gatB (Rv3009c) — family_assigned: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB pfkA (Rv3010c) — requalified: ATP-dependent 6-phosphofructokinase gatA (Rv3011c) — family_assigned: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA gatC (Rv3012c) — family_assigned: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC Rv3013 (Rv3013) — family_assigned: amino acid-binding protein ligA (Rv3014c) — requalified: NAD-dependent DNA ligase LigA Rv3015c (Rv3015c) — requalified: methionine synthase lpqA (Rv3016) — family_assigned: sensor domain-containing protein esxQ (Rv3017c) — requalified: type VII secretion system ESX-3 effector EsxQ esxR (Rv3019c) — family_assigned: WXG100 family type VII secretion target Rv1047 (Rv1047) — family_assigned: IS256-like element IS1081 family transposase trmU (Rv3024c) — requalified: tRNA 2-thiouridine(34) synthase MnmA iscS (Rv3025c) — family_assigned: cysteine desulfurase family protein Rv3026c (Rv3026c) — family_assigned: lysophospholipid acyltransferase family protein Rv3027c (Rv3027c) — family_assigned: GNAT family N-acetyltransferase fixB (Rv3028c) — family_assigned: electron transfer flavoprotein subunit alpha/FixB family pro fixA (Rv3029c) — family_assigned: electron transfer flavoprotein subunit beta/FixA family prot Rv3030 (Rv3030) — family_assigned: methyltransferase domain-containing protein Rv3031 (Rv3031) — family_assigned: glycoside hydrolase family 57 protein Rv3032 (Rv3032) — requalified: glycogen synthase Rv3033 (Rv3033) — requalified: DUF4333 domain-containing protein TB22.2 (Rv3036c) — family_assigned: RsiV family protein Rv3038c (Rv3038c) — family_assigned: methyltransferase domain-containing protein echA17 (Rv3039c) — requalified: enoyl-CoA hydratase Rv3040c (Rv3040c) — requalified: NUDIX hydrolase Rv3041c (Rv3041c) — family_assigned: ABC transporter ATP-binding protein serB2 (Rv3042c) — requalified: phosphoserine phosphatase SerB ctaD (Rv3043c) — family_assigned: cytochrome c oxidase subunit I fecB (Rv3044) — family_assigned: iron-siderophore ABC transporter substrate-binding protein adhC (Rv3045) — requalified: NAD(P)-dependent alcohol dehydrogenase Rv3046c (Rv3046c) — family_assigned: DUF3349 domain-containing protein Rv3047c (Rv3047c) — dark: hypothetical protein Rv3049c (Rv3049c) — requalified: NAD(P)/FAD-dependent oxidoreductase Rv3050c (Rv3050c) — family_assigned: TetR/AcrR family transcriptional regulator nrdI (Rv3052c) — requalified: class Ib ribonucleoside-diphosphate reductase assembly flavo nrdH (Rv3053c) — requalified: redoxin NrdH Rv3054c (Rv3054c) — requalified: NADPH-dependent FMN reductase Rv3055 (Rv3055) — family_assigned: helix-turn-helix domain-containing protein dinP (Rv3056) — requalified: DNA polymerase IV Rv3057c (Rv3057c) — family_assigned: SDR family oxidoreductase Rv3058c (Rv3058c) — family_assigned: TetR/AcrR family transcriptional regulator cyp136 (Rv3059) — requalified: cytochrome P450 Rv3060c (Rv3060c) — family_assigned: FCD domain-containing protein fadE22 (Rv3061c) — requalified: acyl-CoA dehydrogenase ligB (Rv3062) — requalified: ATP-dependent DNA ligase cstA (Rv3063) — family_assigned: carbon starvation CstA family protein Rv3064c (Rv3064c) — family_assigned: DoxX family protein Rv3066 (Rv3066) — family_assigned: TetR/AcrR family transcriptional regulator pgmA (Rv3068c) — requalified: phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-depen 3 312 kb 3 339 kb 3 366 kb 3 392 kb 3 418 kb 3 445 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.