MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 1 359 648–1 439 648 bp (80 000 bp)
+ strand − strand folP2 (Rv1207) — requalified: dihydropteroate synthase gpgS (Rv1208) — requalified: glucosyl-3-phosphoglycerate synthase Rv1209 (Rv1209) — family_assigned: DivIVA domain-containing protein tagA (Rv1210) — requalified: DNA-3-methyladenine glycosylase I glgA (Rv1212c) — requalified: glycogen synthase Rv1215c (Rv1215c) — family_assigned: CocE/NonD family hydrolase Rv1216c (Rv1216c) — family_assigned: isoprenylcysteine carboxylmethyltransferase family protein Rv1217c (Rv1217c) — family_assigned: multidrug efflux ABC transporter permease Rv1218c (Rv1218c) — family_assigned: multidrug efflux ABC transporter ATP-binding protein raaS (Rv1219c) — family_assigned: transcriptional regulator RaaS sigE (Rv1221) — requalified: RNA polymerase sigma factor SigE rseA (Rv1222) — requalified: anti-sigma E factor RseA tatB (Rv1224) — requalified: Sec-independent protein translocase protein TatB Rv1225c (Rv1225c) — family_assigned: HAD-IIA family hydrolase Rv1226c (Rv1226c) — family_assigned: PH domain-containing protein Rv1227c (Rv1227c) — family_assigned: PH domain-containing protein lpqX (Rv1228) — dark: hypothetical protein mrp (Rv1229c) — family_assigned: Mrp/NBP35 family ATP-binding protein Rv1230c (Rv1230c) — family_assigned: lytic transglycosylase domain-containing protein Rv1231c (Rv1231c) — family_assigned: DUF1003 domain-containing protein Rv1232c (Rv1232c) — requalified: magnesium transporter Rv1233c (Rv1233c) — family_assigned: DUF4190 domain-containing protein Rv1234 (Rv1234) — requalified: general stress protein lpqY (Rv1235) — family_assigned: trehalose ABC transporter substrate-binding protein LpqY sugA (Rv1236) — family_assigned: trehalose ABC transporter permease SugA sugB (Rv1237) — family_assigned: trehalose ABC transporter permease SugB sugC (Rv1238) — family_assigned: trehalose ABC transporter ATP-binding protein SugC corA (Rv1239c) — requalified: magnesium/cobalt transporter CorA mdh (Rv1240) — requalified: malate dehydrogenase vapB33 (Rv1241) — requalified: type II toxin-antitoxin system antitoxin VapB33 vapC33 (Rv1242) — family_assigned: type II toxin-antitoxin system VapC family toxin lpqZ (Rv1244) — family_assigned: glycine betaine ABC transporter substrate-binding protein Rv1245c (Rv1245c) — family_assigned: SDR family NAD(P)-dependent oxidoreductase relE (Rv1246c) — requalified: type II toxin-antitoxin system mRNA interferase RelE relB (Rv1247c) — family_assigned: type II toxin-antitoxin system Phd/YefM family antitoxin Rv1248c (Rv1248c) — family_assigned: multifunctional oxoglutarate decarboxylase/oxoglutarate dehy Rv1248c Rv1249c (Rv1249c) — family_assigned: hypothetical protein Rv1250 (Rv1250) — requalified: MFS transporter Rv1251c (Rv1251c) — family_assigned: TM0106 family RecB-like putative nuclease Rv1251c lprE (Rv1252c) — family_assigned: LppP/LprE family lipoprotein deaD (Rv1253) — requalified: DEAD/DEAH box helicase Rv1254 (Rv1254) — requalified: acyltransferase Rv1255c (Rv1255c) — family_assigned: helix-turn-helix domain-containing protein cyp130 (Rv1256c) — requalified: cytochrome P450 Cyp130 Rv1257c (Rv1257c) — family_assigned: FAD-linked oxidase C-terminal domain-containing protein Rv1258c (Rv1258c) — requalified: MFS transporter Rv1260 (Rv1260) — family_assigned: FAD-binding protein Rv1261c (Rv1261c) — requalified: F420H(2)-dependent quinone reductase Rv1262c (Rv1262c) — family_assigned: HIT family protein amiB2 (Rv1263) — requalified: amidase Rv1264 (Rv1264) — requalified: adenylate cyclase pknH (Rv1266c) — requalified: serine/threonine protein kinase PknH embR (Rv1267c) — requalified: response regulator transcription factor EmbR Rv1268c (Rv1268c) — family_assigned: C39 family peptidase Rv1269c (Rv1269c) — family_assigned: DUF4189 domain-containing protein lprA (Rv1270c) — requalified: TLR2 agonist LprA Rv1271c (Rv1271c) — family_assigned: DUF732 domain-containing protein Rv1272c (Rv1272c) — family_assigned: fatty acid ABC transporter ATP-binding protein/permease Rv1273c (Rv1273c) — family_assigned: ABC transporter ATP-binding protein lprB (Rv1274) — family_assigned: DUF3558 domain-containing protein lprC (Rv1275) — family_assigned: DUF3558 domain-containing protein Rv1278 (Rv1278) — family_assigned: AAA family ATPase Rv1278 Rv1279 (Rv1279) — family_assigned: GMC family oxidoreductase N-terminal domain-containing prote 1 364 kb 1 377 kb 1 390 kb 1 404 kb 1 418 kb 1 431 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.