MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 3 977 390–4 057 390 bp (80 000 bp)
+ strand − strand Rv3517 (Rv3517) — family_assigned: hypothetical protein cyp142 (Rv3518c) — requalified: steroid C26-monooxygenase Cyp142 Rv3519 (Rv3519) — family_assigned: acetoacetate decarboxylase family protein ltp4 (Rv3522) — family_assigned: thiolase domain-containing protein ltp3 (Rv3523) — family_assigned: thiolase domain-containing protein Rv3524 (Rv3524) — family_assigned: NHL repeat-containing protein Rv3525c (Rv3525c) — family_assigned: gamma carbonic anhydrase family protein kshA (Rv3526) — family_assigned: 3-ketosteroid-9-alpha-hydroxylase subunit KshA Rv3527 (Rv3527) — family_assigned: hypothetical protein Rv3528c (Rv3528c) — family_assigned: hypothetical protein Rv3529c (Rv3529c) — requalified: TLR2-mediated response inhibitor Rv3530c (Rv3530c) — family_assigned: SDR family oxidoreductase Rv3531c (Rv3531c) — family_assigned: hypothetical protein hsaF (Rv3534c) — requalified: 4-hydroxy-2-oxovalerate aldolase hsaG (Rv3535c) — requalified: acetaldehyde dehydrogenase (acetylating) hsaE (Rv3536c) — requalified: 2-keto-4-pentenoate hydratase kstD (Rv3537) — requalified: 3-oxosteroid 1-dehydrogenase ltp2 (Rv3540c) — requalified: lipid-transfer protein chsH1 (Rv3541c) — family_assigned: 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratas chsH2 (Rv3542c) — family_assigned: 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratas fadE29 (Rv3543c) — requalified: acyl-CoA dehydrogenase FadE29 fadE28 (Rv3544c) — requalified: acyl-CoA dehydrogenase FadE28 fadA5 (Rv3546) — requalified: steroid 3-ketoacyl-CoA thiolase ddn (Rv3547) — requalified: deazaflavin-dependent nitroreductase Ddn Rv3548c (Rv3548c) — family_assigned: SDR family oxidoreductase Rv3549c (Rv3549c) — family_assigned: SDR family oxidoreductase echA20 (Rv3550) — family_assigned: enoyl-CoA hydratase family protein Rv3551 (Rv3551) — family_assigned: CoA transferase subunit A Rv3552 (Rv3552) — family_assigned: CoA-transferase subunit beta Rv3553 (Rv3553) — requalified: nitronate monooxygenase fdxB (Rv3554) — requalified: fatty acid desaturase Rv3555c (Rv3555c) — family_assigned: DUF559 domain-containing protein fadA6 (Rv3556c) — requalified: acetyl-CoA C-acetyltransferase kstR2 (Rv3557c) — family_assigned: TetR family transcriptional regulator KstR2 Rv3559c (Rv3559c) — family_assigned: SDR family oxidoreductase fadE30 (Rv3560c) — family_assigned: acyl-CoA dehydrogenase family protein fadD3 (Rv3561) — requalified: 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden fadE31 (Rv3562) — family_assigned: acyl-CoA dehydrogenase family protein fadE32 (Rv3563) — family_assigned: acyl-CoA dehydrogenase family protein fadE33 (Rv3564) — family_assigned: acyl-CoA dehydrogenase family protein aspB (Rv3565) — requalified: pyridoxal phosphate-dependent aminotransferase hsaB (Rv3567c) — family_assigned: flavin-dependent monooxygenase reductase subunit HsaB hsaC (Rv3568c) — requalified: iron-dependent extradiol dioxygenase HsaC hsaD (Rv3569c) — requalified: alpha/beta fold hydrolase hsaA (Rv3570c) — family_assigned: flavin-dependent monooxygenase oxygenase subunit HsaA kshB (Rv3571) — family_assigned: 3-ketosteroid-9-alpha-hydroxylase reductase subunit Rv3572 (Rv3572) — family_assigned: hypothetical protein fadE34 (Rv3573c) — requalified: acyl-CoA dehydrogenase fadE34 kstR (Rv3574) — family_assigned: cholesterol catabolism transcriptional regulator KstR Rv3575c (Rv3575c) — family_assigned: LacI family DNA-binding transcriptional regulator arsB2 (Rv3578) — requalified: arsenic transport integral membrane protein ArsB rlmB (Rv3579c) — requalified: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB ispF (Rv3581c) — requalified: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase ispD (Rv3582c) — requalified: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase carD (Rv3583c) — requalified: RNA polymerase-binding transcription factor CarD lpqE (Rv3584) — family_assigned: hypothetical protein radA (Rv3585) — requalified: DNA repair protein RadA disA (Rv3586) — requalified: DNA integrity scanning diadenylate cyclase DisA Rv3587c (Rv3587c) — family_assigned: hypothetical protein canB (Rv3588c) — requalified: beta-carbonic anhydrase CanB mutY (Rv3589) — requalified: A/G-specific adenine glycosylase Rv3591c (Rv3591c) — family_assigned: alpha/beta hydrolase 3 982 kb 3 996 kb 4 010 kb 4 023 kb 4 036 kb 4 050 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.