MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

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+ strand − strand Rv2542 (Rv2542) — family_assigned: alpha/beta hydrolase family protein lppA (Rv2543) — family_assigned: LppA family lipoprotein lppB (Rv2544) — family_assigned: LppA family lipoprotein vapB18 (Rv2545) — family_assigned: type II toxin-antitoxin system VapB family antitoxin vapC18 (Rv2546) — family_assigned: PIN domain nuclease vapB19 (Rv2547) — family_assigned: CopG family transcriptional regulator vapC19 (Rv2548) — family_assigned: type II toxin-antitoxin system VapC family toxin vapC20 (Rv2549c) — requalified: type II toxin-antitoxin system toxin 23S rRNA-specific endon vapB20 (Rv2550c) — requalified: type II toxin-antitoxin system antitoxin VapB20 Rv2551c (Rv2551c) — family_assigned: A24 family peptidase aroE (Rv2552c) — requalified: shikimate dehydrogenase mltG (Rv2553c) — requalified: endolytic transglycosylase MltG ruvX (Rv2554c) — requalified: Holliday junction resolvase RuvX alaS (Rv2555c) — requalified: alanine--tRNA ligase alaS Rv2556c (Rv2556c) — requalified: secondary thiamine-phosphate synthase enzyme YjbQ Rv2559c (Rv2559c) — requalified: replication-associated recombination protein A Rv2560 (Rv2560) — family_assigned: DUF2189 domain-containing protein Rv2563 (Rv2563) — family_assigned: ABC transporter permease glnQ (Rv2564) — family_assigned: ATP-binding cassette domain-containing protein Rv2565 (Rv2565) — family_assigned: patatin-like phospholipase family protein Rv2567 (Rv2567) — requalified: circularly permuted type 2 ATP-grasp protein Rv2567 Rv2568c (Rv2568c) — family_assigned: putative zinc-binding metallopeptidase Rv2569c (Rv2569c) — family_assigned: transglutaminase family protein Rv2570 (Rv2570) — family_assigned: MmcQ/YjbR family DNA-binding protein Rv2571c (Rv2571c) — family_assigned: aromatic acid exporter family protein aspS (Rv2572c) — requalified: aspartate--tRNA ligase Rv2574 (Rv2574) — family_assigned: SRPBCC family protein Rv2575 (Rv2575) — requalified: neutral zinc metallopeptidase Rv2576c (Rv2576c) — family_assigned: hypothetical protein Rv2577 (Rv2577) — family_assigned: metallophosphoesterase family protein Rv2578c (Rv2578c) — family_assigned: Rv2578c family radical SAM protein hisS (Rv2580c) — requalified: histidine--tRNA ligase Rv2581c (Rv2581c) — requalified: MBL fold metallo-hydrolase relA (Rv2583c) — family_assigned: RelA/SpoT family protein relA apt (Rv2584c) — requalified: adenine phosphoribosyltransferase Rv2585c (Rv2585c) — family_assigned: ABC transporter substrate-binding protein secF (Rv2586c) — family_assigned: protein translocase subunit SecF secD (Rv2587c) — family_assigned: protein translocase subunit SecD yajC (Rv2588c) — family_assigned: preprotein translocase subunit YajC gabT (Rv2589) — requalified: 4-aminobutyrate--2-oxoglutarate transaminase fadD9 (Rv2590) — requalified: carboxylic acid reductase fadD9 ruvB (Rv2592c) — requalified: Holliday junction branch migration DNA helicase RuvB ruvA (Rv2593c) — requalified: Holliday junction branch migration protein RuvA ruvC (Rv2594c) — requalified: crossover junction endodeoxyribonuclease RuvC vapB40 (Rv2595) — family_assigned: AbrB/MazE/SpoVT family DNA-binding domain-containing protein vapC40 (Rv2596) — family_assigned: type II toxin-antitoxin system VapC family toxin Rv2597 (Rv2597) — dark: DUF4178 domain-containing protein Rv2598 (Rv2598) — family_assigned: DUF2617 family protein Rv2599 (Rv2599) — family_assigned: DUF4247 domain-containing protein vapC41 (Rv2602) — family_assigned: type II toxin-antitoxin system VapC family toxin Rv2603c (Rv2603c) — family_assigned: YebC/PmpR family DNA-binding transcriptional regulator snoP (Rv2604c) — family_assigned: pyridoxal 5'-phosphate synthase glutaminase subunit PdxT tesB2 (Rv2605c) — requalified: acyl-CoA thioesterase II snzP (Rv2606c) — family_assigned: pyridoxal 5'-phosphate synthase lyase subunit PdxS pdxH (Rv2607) — requalified: pyridoxamine 5'-phosphate oxidase Rv2609c (Rv2609c) — family_assigned: NUDIX domain-containing protein pimA (Rv2610c) — requalified: phosphatidyl-myo-inositol alpha-mannosyltransferase Rv2611c (Rv2611c) — requalified: phosphatidylinositol mannoside acyltransferase Rv2613c (Rv2613c) — requalified: ATP adenylyltransferase thrS (Rv2614c) — requalified: threonine--tRNA ligase Rv2616 (Rv2616) — family_assigned: DUF1990 family protein 2 902 kb 2 916 kb 2 930 kb 2 943 kb 2 956 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.