MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 3 653 397–3 733 397 bp (80 000 bp)
+ strand − strand alkB (Rv3252c) — requalified: alkane 1-monooxygenase Rv3253c (Rv3253c) — requalified: amino acid permease Rv3254 (Rv3254) — requalified: oxidoreductase manA (Rv3255c) — requalified: mannose-6-phosphate isomerase%2C class I Rv3256c (Rv3256c) — requalified: TobH protein pmmA (Rv3257c) — requalified: phosphomannomutase/phosphoglucomutase Rv3259 (Rv3259) — family_assigned: metallopeptidase family protein fbiA (Rv3261) — requalified: 2-phospho-L-lactate transferase fbiB (Rv3262) — requalified: coenzyme F420-0:L-glutamate ligase Rv3263 (Rv3263) — requalified: class I SAM-dependent methyltransferase rmlD (Rv3266c) — requalified: dTDP-4-dehydrorhamnose reductase lcp1 (Rv3267) — requalified: phosphotransferase Lcp1 Rv3269 (Rv3269) — family_assigned: DUF1490 family protein ctpC (Rv3270) — requalified: manganese-exporting P-type ATPase CtpC ctpC Rv3271c (Rv3271c) — requalified: cation transporter Rv3272 (Rv3272) — requalified: CoA transferase fadE25 (Rv3274c) — requalified: acyl-CoA dehydrogenase purE (Rv3275c) — requalified: 5-(carboxyamino)imidazole ribonucleotide mutase purK (Rv3276c) — requalified: 5-(carboxyamino)imidazole ribonucleotide synthase Rv3278c (Rv3278c) — family_assigned: PH domain-containing protein birA (Rv3279c) — requalified: biotin--[acetyl-CoA-carboxylase] ligase accD5 (Rv3280) — family_assigned: acyl-CoA carboxylase subunit beta accE5 (Rv3281) — family_assigned: acyl-CoA carboxylase subunit epsilon Rv3282 (Rv3282) — requalified: nucleoside triphosphate pyrophosphatase sseA (Rv3283) — requalified: sulfurtransferase Rv3284 (Rv3284) — family_assigned: SufE family protein accA3 (Rv3285) — family_assigned: acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alph sigF (Rv3286c) — requalified: RNA polymerase sigma factor SigF rsbW (Rv3287c) — requalified: anti-sigma B factor RsbW Rv3289c (Rv3289c) — dark: hypothetical protein lat (Rv3290c) — requalified: L-lysine 6-transaminase lrpA (Rv3291c) — family_assigned: transcriptional regulator LrpA Rv3292 (Rv3292) — family_assigned: VOC family protein Rv3295 (Rv3295) — family_assigned: TetR/AcrR family transcriptional regulator lhr (Rv3296) — requalified: ATP-dependent helicase lhr nei (Rv3297) — requalified: endonuclease VIII Nei2 lpqC (Rv3298c) — family_assigned: PHB depolymerase family esterase atsB (Rv3299c) — requalified: arylsulfatase AtsB atsB Rv3300c (Rv3300c) — family_assigned: RluA family pseudouridine synthase phoY1 (Rv3301c) — requalified: phosphate signaling complex protein PhoU glpD2 (Rv3302c) — requalified: glycerol-3-phosphate dehydrogenase/oxidase lpdA (Rv3303c) — requalified: NAD(P)H-quinone dehydrogenase Rv3304 (Rv3304) — requalified: gamma-glutamylcyclotransferase deoD (Rv3307) — requalified: purine-nucleoside phosphorylase pmmB (Rv3308) — requalified: phospho-sugar mutase upp (Rv3309c) — requalified: uracil phosphoribosyltransferase sapM (Rv3310) — requalified: phosphatidylinositol-3-phosphatase Rv3311 (Rv3311) — family_assigned: primosomal protein Rv3312c (Rv3312c) — family_assigned: alpha/beta hydrolase add (Rv3313c) — requalified: adenosine deaminase deoA (Rv3314c) — requalified: thymidine phosphorylase cdd (Rv3315c) — requalified: cytidine deaminase sdhC (Rv3316) — family_assigned: succinate dehydrogenase%2C cytochrome b556 subunit sdhD (Rv3317) — family_assigned: succinate dehydrogenase hydrophobic membrane anchor subunit sdhA (Rv3318) — family_assigned: succinate dehydrogenase flavoprotein subunit sdhB (Rv3319) — family_assigned: succinate dehydrogenase iron-sulfur subunit vapC44 (Rv3320c) — family_assigned: type II toxin-antitoxin system VapC family toxin vapB44 (Rv3321c) — family_assigned: CopG family transcriptional regulator moaC3 (Rv3324c) — requalified: cyclic pyranopterin monophosphate synthase MoaC 3 658 kb 3 672 kb 3 686 kb 3 699 kb 3 712 kb 3 726 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.