Genes
3906 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| mftC Rv0693 |
mtbc0_000734 |
mycofactocin radical SAM maturase MftC | Mycofactocin radical SAM maturase. Pfam: Radical_SAM (PF04055.28), SPASM (PF13186.12). | Radical_SAM SPASM |
Resolved |
| mftD Rv0694 |
mtbc0_000735 |
mycofactocin system heme/flavin oxidoreductase MftD | Pre-mycofactocin synthase MftD. Pfam: FMN_dh (PF01070.25), IMPDH (PF00478.32), Glu_synthase (PF01645.24). | FMN_dh IMPDH Glu_synthase |
Resolved |
| mftE Rv0695 |
mtbc0_000736 |
mycofactocin system creatinine amidohydrolase family protein MftE | Mycofactocin biosynthesis peptidyl-dipeptidase MftE. Pfam: Creatininase (PF02633.20). | Creatininase |
Resolved |
| mftF Rv0696 |
mtbc0_000737 |
mycofactocin biosynthesis glycosyltransferase MftF | Mycofactocin biosynthesis glycosyltransferase MftF. Pfam: Glyco_tranf_2_3 (PF13641.13), Glycos_transf_2 (PF00535.33), Glyco_tranf_2_2 (PF10111.15), Glyco_trans_2_3 (PF13632.13). | Glyco_tranf_2_3 Glycos_transf_2 Glyco_tranf_2_2 Glyco_trans_2_3 |
Resolved |
| mftG Rv0697 |
mtbc0_000738 |
dehydrogenase | Mycofactocin system GMC family oxidoreductase MftG. Pfam: GMC_oxred_N (PF00732.26), GMC_oxred_C (PF05199.20). | GMC_oxred_N GMC_oxred_C |
Family assigned |
| Rv0698 Rv0698 |
- |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| Rv0699 Rv0699 |
mtbc0_000740 |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| rpsJ Rv0700 |
- |
30S ribosomal protein S10 | 30S ribosomal protein S10. Pfam: Ribosomal_S10 (PF00338.28). | Ribosomal_S10 |
Resolved |
| rplC Rv0701 |
mtbc0_000743 |
50S ribosomal protein L3 | 50S ribosomal protein L3. Pfam: Ribosomal_L3 (PF00297.29). | Ribosomal_L3 |
Resolved |
| rplD Rv0702 |
mtbc0_000744 |
50S ribosomal protein L4 | 50S ribosomal protein L4. Pfam: Ribosomal_L4 (PF00573.28). | Ribosomal_L4 |
Resolved |
| rplW Rv0703 |
mtbc0_000745 |
50S ribosomal protein L23 | 50S ribosomal protein L23. Pfam: Ribosomal_L23 (PF00276.26). | Ribosomal_L23 |
Resolved |
| rplB Rv0704 |
mtbc0_000746 |
50S ribosomal protein L2 | 50S ribosomal protein L2. Pfam: Ribosomal_L2_N (PF00181.31), Ribosomal_L2_C (PF03947.25). | Ribosomal_L2_N Ribosomal_L2_C |
Resolved |
| rpsS Rv0705 |
mtbc0_000747 |
30S ribosomal protein S19 | 30S ribosomal protein S19. Pfam: Ribosomal_S19 (PF00203.27). | Ribosomal_S19 |
Resolved |
| rplV Rv0706 |
mtbc0_000748 |
50S ribosomal protein L22 | 50S ribosomal protein L22. Pfam: Ribosomal_L22 (PF00237.25). | Ribosomal_L22 |
Resolved |
| rpsC Rv0707 |
mtbc0_000749 |
30S ribosomal protein S3 | 30S ribosomal protein S3. Pfam: KH_2 (PF07650.24), Ribosomal_S3_C (PF00189.26). | KH_2 Ribosomal_S3_C |
Resolved |
| rplP Rv0708 |
mtbc0_000750 |
50S ribosomal protein L16 | 50S ribosomal protein L16. Pfam: Ribosomal_L16 (PF00252.25). | Ribosomal_L16 |
Resolved |
| rpmC Rv0709 |
mtbc0_000751 |
50S ribosomal protein L29 | 50S ribosomal protein L29. Pfam: Ribosomal_L29 (PF00831.29). | Ribosomal_L29 |
Resolved |
| rpsQ Rv0710 |
mtbc0_000752 |
30S ribosomal protein S17 | 30S ribosomal protein S17. Pfam: Ribosomal_S17 (PF00366.27). | Ribosomal_S17 |
Resolved |
| atsA Rv0711 |
mtbc0_000753 |
arylsulfatase AtsA | Arylsulfatase AtsA. Pfam: Sulfatase (PF00884.29). | Sulfatase |
Resolved |
| Rv0712 Rv0712 |
mtbc0_000754 |
hypothetical protein | Formylglycine-generating enzyme family protein. Pfam: FGE-sulfatase (PF03781.23). | FGE-sulfatase |
Family assigned |
| Rv0713 Rv0713 |
mtbc0_000755 |
transmembrane protein | Conserved hypothetical protein; DUF domain(s) DUF4436. Function unknown. | DUF4436 |
Still unknown |
| rplN Rv0714 |
- |
50S ribosomal protein L14 | 50S ribosomal protein L14. Pfam: Ribosomal_L14 (PF00238.25). | Ribosomal_L14 |
Resolved |
| rplX Rv0715 |
mtbc0_000757 |
50S ribosomal protein L24 | 50S ribosomal protein L24. Pfam: KOW (PF00467.36), ribosomal_L24 (PF17136.11). | KOW ribosomal_L24 |
Resolved |
| rplE Rv0716 |
mtbc0_000758 |
50S ribosomal protein L5 | 50S ribosomal protein L5. Pfam: Ribosomal_L5 (PF00281.25), Ribosomal_L5_C (PF00673.27). | Ribosomal_L5 Ribosomal_L5_C |
Resolved |
| rpsN1 Rv0717 |
- |
30S ribosomal protein S14 | 30S ribosomal protein S14. Pfam: Ribosomal_S14 (PF00253.28). | Ribosomal_S14 |
Resolved |
| rpsH Rv0718 |
- |
30S ribosomal protein S8 | 30S ribosomal protein S8. Pfam: Ribosomal_S8 (PF00410.25). | Ribosomal_S8 |
Resolved |
| rplF Rv0719 |
- |
50S ribosomal protein L6 | 50S ribosomal protein L6. Pfam: Ribosomal_L6 (PF00347.29). | Ribosomal_L6 |
Resolved |
| rplR Rv0720 |
mtbc0_000762 |
50S ribosomal protein L18 | 50S ribosomal protein L18. Pfam: Ribosomal_L18p (PF00861.28). | Ribosomal_L18p |
Resolved |
| rpsE Rv0721 |
mtbc0_000763 |
30S ribosomal protein S5 | 30S ribosomal protein S5. Pfam: Ribosomal_S5 (PF00333.27), Ribosomal_S5_C (PF03719.22). | Ribosomal_S5 Ribosomal_S5_C |
Resolved |
| rpmD Rv0722 |
mtbc0_000764 |
50S ribosomal protein L30 | 50S ribosomal protein L30. Pfam: Ribosomal_L30 (PF00327.26). | Ribosomal_L30 |
Resolved |
| rplO Rv0723 |
mtbc0_000765 |
50S ribosomal protein L15 | 50S ribosomal protein L15. Pfam: Ribosomal_L27A (PF00828.26). | Ribosomal_L27A |
Resolved |
| sppA Rv0724 |
- |
protease IV SppA | Protease IV SppA. Pfam: Peptidase_S49 (PF01343.24). | Peptidase_S49 |
Resolved |
| Rv0725c Rv0725c |
- |
hypothetical protein | Contains LCM (PF04072.21) domain(s); putative function inferred from the domain architecture. | LCM |
Family assigned |
| Rv0726c Rv0726c |
mtbc0_000768 |
S-adenosylmethionine-dependent methyltransferase | Class I SAM-dependent methyltransferase. Pfam: LCM (PF04072.21). | LCM |
Resolved |
| fucA Rv0727c |
mtbc0_000769 |
L-fuculose phosphate aldolase FucA | L-fuculose-phosphate aldolase. Pfam: Aldolase_II (PF00596.28). | Aldolase_II |
Resolved |
| serA2 Rv0728c |
mtbc0_000770 |
D-3-phosphoglycerate dehydrogenase SerA | D-3-phosphoglycerate dehydrogenase SerA. Pfam: 2-Hacid_dh (PF00389.37), 2-Hacid_dh_C (PF02826.26). | 2-Hacid_dh 2-Hacid_dh_C |
Resolved |
| xylB Rv0729 |
mtbc0_000771 |
D-xylulose kinase XylB | FGGY-family carbohydrate kinase. Pfam: FGGY_N (PF00370.28), FGGY_C (PF02782.23). | FGGY_N FGGY_C |
Resolved |
| Rv0730 Rv0730 |
- |
GCN5-like N-acetyltransferase | GCN5-like N-acetyltransferase. Pfam: Acetyltransf_3 (PF13302.14), Acetyltransf_1 (PF00583.32). | Acetyltransf_3 Acetyltransf_1 |
Resolved |
| Rv0731c Rv0731c |
mtbc0_000773 |
S-adenosylmethionine-dependent methyltransferase | Class I SAM-dependent methyltransferase. Pfam: LCM (PF04072.21). | LCM |
Resolved |
| secY Rv0732 |
mtbc0_000774 |
preprotein translocase SecY | Preprotein translocase subunit SecY. Pfam: SecY (PF00344.26). | SecY |
Family assigned |
| adk Rv0733 |
mtbc0_000775 |
adenylate kinase | Adenylate kinase. Pfam: AAA_33 (PF13671.13), AAA_18 (PF13238.13), ADK (PF00406.30), AAA_17 (PF13207.13). | AAA_33 AAA_18 ADK AAA_17 |
Resolved |
| mapA Rv0734 |
- |
methionine aminopeptidase | Methionine aminopeptidase. Pfam: Peptidase_M24 (PF00557.30). | Peptidase_M24 |
Resolved |
| sigL Rv0735 |
mtbc0_000777 |
ECF RNA polymerase sigma factor SigL | Sigma-70 family RNA polymerase sigma factor SigL. Pfam: Sigma70_ECF (PF07638.18), Sigma70_r2 (PF04542.21), PhyR_sigma2 (PF22029.3), Sigma70_r4_2 (PF08281.19), Sigma70_r4 (PF04545.23). | Sigma70_ECF Sigma70_r2 PhyR_sigma2 Sigma70_r4_2 Sigma70_r4 |
Family assigned |
| rslA Rv0736 |
mtbc0_000778 |
anti-sigma-L factor RslA | Anti-sigma-L factor RslA. Pfam: zf-HC2 (PF13490.12). | zf-HC2 |
Resolved |
| Rv0737 Rv0737 |
mtbc0_000780 |
transcriptional regulator | MarR family transcriptional regulator. Pfam: MarR_2 (PF12802.14), MarR (PF01047.29), HTH_27 (PF13463.13). | MarR_2 MarR HTH_27 |
Family assigned |
| Rv0738 Rv0738 |
mtbc0_000782 |
hypothetical protein | TIGR03086 family metal-binding protein. Pfam: MDMPI_N (PF11716.14). | MDMPI_N |
Family assigned |
| Rv0739 Rv0739 |
- |
hypothetical protein | Conserved hypothetical protein; DUF domain(s) DUF4226. Function unknown. Foldseek best (non-significant) hit: 8e4g-assembly1_a Remodeling of the bacteriophage T7 during initial inf (prob 0.99, TM 0.69). | DUF4226 |
Still unknown |
| Rv0740 Rv0740 |
mtbc0_000785 |
hypothetical protein | Conserved hypothetical protein; DUF domain(s) DUF7956. Function unknown. Foldseek best (non-significant) hit: 7jxh-assembly2_A HER2 in complex with JBJ-08-178-01 (prob 0.08, TM 0.30). | DUF7956 |
Still unknown |
| Rv0742 Rv0742 |
- |
hypothetical protein | Contains PE (PF00934.26) domain(s); putative function inferred from the domain architecture. | PE |
Family assigned |
| Rv0743c Rv0743c |
mtbc0_000788 |
hypothetical protein | DUF6036 family nucleotidyltransferase. | DUF6036 |
Family assigned |