MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 4 257 264–4 417 264 bp (160 000 bp)
+ strand − strand Rv3786c (Rv3786c) — family_assigned: peptidoglycan DD-metalloendopeptidase family protein Rv3787c (Rv3787c) — requalified: class I SAM-dependent methyltransferase Rv3788 (Rv3788) — family_assigned: GreA/GreB family elongation factor Rv3789 (Rv3789) — requalified: arabinogalactan biosynthesis protein dprE1 (Rv3790) — requalified: decaprenylphospho-beta-D-ribofuranose 2-dehydrogenase DprE1 aftA (Rv3792) — requalified: galactan 5-O-arabinofuranosyltransferase embC (Rv3793) — requalified: arabinosyltransferase EmbC embA (Rv3794) — requalified: arabinosyltransferase EmbA embB (Rv3795) — requalified: arabinosyltransferase EmbB fadE35 (Rv3797) — requalified: DNA alkylation response protein Rv1313c (Rv1313c) — family_assigned: ISL3-like element IS1557 family transposase accD4 (Rv3799c) — family_assigned: acyl-CoA carboxylase subunit beta pks13 (Rv3800c) — requalified: polyketide synthase Pks13 pks13 Rv3802c (Rv3802c) — requalified: phospholipase fbpA (Rv3804c) — requalified: diacylglycerol acyltransferase/mycolyltransferase Ag85A ubiA (Rv3806c) — requalified: decaprenyl-phosphate phosphoribosyltransferase glfT2 (Rv3808c) — requalified: galactofuranosyl transferase GlfT2 glf (Rv3809c) — requalified: UDP-galactopyranose mutase pirG (Rv3810) — requalified: exported repetitive protein Rv3813c (Rv3813c) — family_assigned: Cof-type HAD-IIB family hydrolase Rv3814c (Rv3814c) — requalified: 1-acyl-sn-glycerol-3-phosphate acyltransferase Rv3815c (Rv3815c) — family_assigned: lysophospholipid acyltransferase family protein Rv3816c (Rv3816c) — requalified: 1-acyl-sn-glycerol-3-phosphate acyltransferase Rv3817 (Rv3817) — requalified: aminoglycoside 3'-phosphotransferase Rv3818 (Rv3818) — requalified: MBL fold metallo-hydrolase Rv3819 (Rv3819) — dark: hypothetical protein sap (Rv3821) — requalified: sulfolipid-1 biosynthesis transporter Sap chp1 (Rv3822) — requalified: sulfolipid-1 biosynthesis membrane-anchored acyltransferase mmpL8 (Rv3823c) — requalified: sulfolipid-1 RND transporter MmpL8 papA1 (Rv3824c) — requalified: acyltransferase PapA1 pks2 (Rv3825c) — requalified: phthioceranic/hydroxyphthioceranic acid synthase pks2 fadD23 (Rv3826) — requalified: long-chain-fatty-acid--CoA ligase FadD23 tnpB (Rv2791c) — family_assigned: IS607 family element RNA-guided endonuclease TnpB Rv2792c (Rv2792c) — family_assigned: IS607-like element IS1537 family transposase Rv3829c (Rv3829c) — requalified: NAD(P)/FAD-dependent oxidoreductase Rv3830c (Rv3830c) — family_assigned: TetR/AcrR family transcriptional regulator Rv3831 (Rv3831) — family_assigned: DUF2834 domain-containing protein Rv3832c (Rv3832c) — family_assigned: methyltransferase domain-containing protein Rv3833 (Rv3833) — family_assigned: helix-turn-helix transcriptional regulator serS (Rv3834c) — requalified: serine--tRNA ligase Rv3835 (Rv3835) — family_assigned: septum formation family protein Rv3836 (Rv3836) — family_assigned: metallopeptidase family protein Rv3837c (Rv3837c) — family_assigned: histidine phosphatase family protein pheA (Rv3838c) — requalified: prephenate dehydratase Rv3839 (Rv3839) — requalified: DUF2470 domain-containing protein bfrB (Rv3841) — requalified: ferritin BfrB glpQ1 (Rv3842c) — requalified: glycerophosphodiester phosphodiesterase Rv3843c (Rv3843c) — family_assigned: DUF4328 domain-containing protein Rv3845 (Rv3845) — family_assigned: IS110 family transposase sodA (Rv3846) — requalified: superoxide dismutase Rv3847 (Rv3847) — requalified: peptidase Rv3848 (Rv3848) — family_assigned: TMEM165/GDT1 family protein espR (Rv3849) — family_assigned: type VII secretion system ESX-1 transcriptional regulator Es Rv3850 (Rv3850) — family_assigned: DUF6474 family protein Rv3851 (Rv3851) — dark: hypothetical protein hns (Rv3852) — family_assigned: histone-like protein Hns rraA (Rv3853) — requalified: ribonuclease E activity regulator RraA ethA (Rv3854c) — requalified: FAD-containing monooxygenase EthA ethR (Rv3855) — family_assigned: HTH-type transcriptional regulator EthR Rv3856c (Rv3856c) — family_assigned: PHP domain-containing protein gltD (Rv3858c) — family_assigned: glutamate synthase subunit beta gltB (Rv3859c) — family_assigned: glutamate synthase large subunit gltB Rv3860 (Rv3860) — requalified: ATPase Rv3861 (Rv3861) — dark: hypothetical protein espE (Rv3864) — requalified: type VII secretion system ESX-1 associated protein EspE espF (Rv3865) — requalified: type VII secretion system ESX-1 associated protein EspF espG1 (Rv3866) — requalified: type VII secretion system ESX-1 adaptor EspG1 espH (Rv3867) — requalified: type VII secretion system ESX-1 associated protein EspH eccA1 (Rv3868) — family_assigned: type VII secretion system ESX-1 AAA family ATPase EccA1 eccB1 (Rv3869) — family_assigned: type VII secretion system ESX-1 subunit EccB1 eccCa1 (Rv3870) — family_assigned: type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase E eccCb1 (Rv3871) — family_assigned: type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase E esxB (Rv3874) — family_assigned: type VII secretion system ESX-1 WXG100 family target CFP-10 espI (Rv3876) — family_assigned: MinD/ParA family protein eccD1 (Rv3877) — family_assigned: type VII secretion system ESX-1 subunit EccD1 espJ (Rv3878) — requalified: type VII secretion system ESX-1 associated protein EspJ espL (Rv3880c) — requalified: type VII secretion system ESX-1 associated protein EspL espB (Rv3881c) — requalified: type VII secretion system ESX-1 target EspB eccE1 (Rv3882c) — family_assigned: type VII secretion system ESX-1 subunit EccE1 mycP1 (Rv3883c) — requalified: type VII secretion system ESX-1 serine protease mycosin MycP eccA2 (Rv3884c) — family_assigned: type VII secretion system ESX-2 AAA family ATPase EccA2 eccE2 (Rv3885c) — family_assigned: type VII secretion system ESX-2 subunit EccE2 mycP2 (Rv3886c) — requalified: type VII secretion system ESX-2 serine protease mycosin MycP eccD2 (Rv3887c) — family_assigned: type VII secretion system ESX-2 subunit EccD2 Rv3888c (Rv3888c) — family_assigned: MinD/ParA family protein espG2 (Rv3889c) — requalified: type VII secretion system ESX-2 associated protein EspG2 esxC (Rv3890c) — family_assigned: WXG100 family type VII secretion target esxD (Rv3891c) — family_assigned: WXG100 family type VII secretion target eccC2 (Rv3894c) — family_assigned: type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase E eccC2 eccB2 (Rv3895c) — family_assigned: type VII secretion system ESX-2 subunit EccB2 Rv3896c (Rv3896c) — requalified: transglycosylase Rv3898c (Rv3898c) — dark: hypothetical protein Rv3900c (Rv3900c) — family_assigned: hypothetical protein Rv3901c (Rv3901c) — dark: hypothetical protein ift (Rv3902c) — requalified: necrotizing toxin immunity factor IFT cpnT (Rv3903c) — requalified: outer membrane channel protein/necrotizing toxin glycohydrol esxF (Rv3905c) — requalified: pore-forming CpnT exporter EsxF Rv3906c (Rv3906c) — requalified: pullulanase 4 266 kb 4 293 kb 4 320 kb 4 346 kb 4 372 kb 4 399 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.