MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 3 216 994–3 376 994 bp (160 000 bp)
+ strand − strand Rv2887 (Rv2887) — family_assigned: MarR family transcriptional regulator amiC (Rv2888c) — requalified: amidase tsf (Rv2889c) — requalified: translation elongation factor Ts rpsB (Rv2890c) — requalified: 30S ribosomal protein S2 Rv2893 (Rv2893) — requalified: LLM class F420-dependent oxidoreductase xerC (Rv2894c) — requalified: tyrosine recombinase XerC viuB (Rv2895c) — requalified: siderophore-interacting protein dprA (Rv2896c) — requalified: DNA-processing protein DprA Rv2897c (Rv2897c) — family_assigned: YifB family Mg chelatase-like AAA ATPase Rv2898c (Rv2898c) — family_assigned: YraN family protein fdhD (Rv2899c) — requalified: formate dehydrogenase accessory sulfurtransferase FdhD fdhF (Rv2900c) — family_assigned: FdhF/YdeP family oxidoreductase Rv2901c (Rv2901c) — dark: DUF2469 domain-containing protein rnhB (Rv2902c) — requalified: ribonuclease HII lepB (Rv2903c) — requalified: signal peptidase I rplS (Rv2904c) — requalified: 50S ribosomal protein L19 lppW (Rv2905) — family_assigned: hypothetical protein trmD (Rv2906c) — requalified: tRNA (guanosine(37)-N1)-methyltransferase TrmD rimM (Rv2907c) — requalified: ribosome maturation factor RimM Rv2908c (Rv2908c) — family_assigned: RNA-binding protein rpsP (Rv2909c) — requalified: 30S ribosomal protein S16 Rv2912c (Rv2912c) — family_assigned: TetR/AcrR family transcriptional regulator Rv2913c (Rv2913c) — family_assigned: amidohydrolase family protein pknI (Rv2914c) — requalified: serine/threonine protein kinase PknI Rv2915c (Rv2915c) — family_assigned: amidohydrolase family protein ffh (Rv2916c) — requalified: signal recognition particle protein glnD (Rv2918c) — requalified: [protein-PII] uridylyltransferase glnB (Rv2919c) — family_assigned: nitrogen regulatory protein P-II amt (Rv2920c) — requalified: ammonium transporter ftsY (Rv2921c) — requalified: signal recognition particle-docking protein FtsY smc (Rv2922c) — requalified: chromosome segregation protein SMC Rv2923c (Rv2923c) — family_assigned: OsmC family protein fpg (Rv2924c) — requalified: DNA-formamidopyrimidine glycosylase rnc (Rv2925c) — requalified: ribonuclease III sepIVA (Rv2927c) — requalified: cell division protein SepIVA tesA (Rv2928) — requalified: thioesterase TesA Rv2929 (Rv2929) — family_assigned: hypothetical protein fadD26 (Rv2930) — requalified: long-chain-fatty-acid--AMP ligase FAAL26/FadD26 ppsA (Rv2931) — requalified: phthiocerol type I polyketide synthase PpsA ppsA ppsB (Rv2932) — requalified: phthiocerol type I polyketide synthase PpsB ppsB ppsC (Rv2933) — requalified: phthiocerol type I polyketide synthase PpsC ppsC ppsD (Rv2934) — requalified: phthiocerol type I polyketide synthase PpsD ppsD ppsE (Rv2935) — requalified: phthiocerol type I polyketide synthase PpsE ppsE drrA (Rv2936) — family_assigned: daunorubicin ABC transporter ATP-binding protein DrrA drrB (Rv2937) — family_assigned: daunorubicin ABC transporter permease DrrB drrC (Rv2938) — family_assigned: ABC transporter permease papA5 (Rv2939) — requalified: phthiocerol/phthiodiolone dimycocerosyl transferase mas (Rv2940c) — requalified: mycocerosate synthase mas fadD28 (Rv2941) — requalified: fatty-acid--AMP ligase FAAL28/FadD28 mmpL7 (Rv2942) — requalified: phthiocerol dimycocerosate RND transporter MmpL7 lppX (Rv2945c) — requalified: LppX_LprAFG lipoprotein fadD22 (Rv2948c) — requalified: p-hydroxybenzoic acid--AMP ligase FadD22 Rv2949c (Rv2949c) — family_assigned: chorismate pyruvate-lyase family protein Rv2951c (Rv2951c) — requalified: phthiodiolone/phenolphthiodiolone dimycocerosates ketoreduct Rv2952 (Rv2952) — requalified: phthiotriol/phenolphthiotriol dimycocerosates methyltransfer Rv2953 (Rv2953) — requalified: trans-acting enoyl reductase Rv2954c (Rv2954c) — requalified: [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rham Rv2955c (Rv2955c) — requalified: [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyran Rv2956 (Rv2956) — requalified: [alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3) Rv2957 (Rv2957) — requalified: PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c (Rv2958c) — requalified: PGL/p-HBAD biosynthesis glycosyltransferase Rv2959c (Rv2959c) — requalified: rhamnosyl O-methyltransferase Rv2960c (Rv2960c) — dark: hypothetical protein Rv2962c (Rv2962c) — requalified: PGL/p-HBAD biosynthesis rhamnosyltransferase Rv2963 (Rv2963) — requalified: permease purU (Rv2964) — requalified: formyltetrahydrofolate deformylase kdtB (Rv2965c) — requalified: pantetheine-phosphate adenylyltransferase rsmD (Rv2966c) — requalified: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD pca (Rv2967c) — requalified: pyruvate carboxylase Rv2968c (Rv2968c) — family_assigned: vitamin K epoxide reductase family protein Rv2969c (Rv2969c) — requalified: mycothiol-dependent reductase lipN (Rv2970c) — requalified: lipase/esterase LipN Rv2971 (Rv2971) — requalified: aldo/keto reductase Rv2972c (Rv2972c) — family_assigned: HNH endonuclease family protein recG (Rv2973c) — requalified: ATP-dependent DNA helicase RecG ung (Rv2976c) — requalified: uracil-DNA glycosylase thiL (Rv2977c) — requalified: thiamine-phosphate kinase tnpB (Rv2978c) — family_assigned: IS607 family element RNA-guided endonuclease TnpB Rv2979c (Rv2979c) — family_assigned: IS607 family transposase Rv2980 (Rv2980) — dark: DUF3515 domain-containing protein ddlA (Rv2981c) — requalified: D-alanine--D-alanine ligase DdlA gpdA2 (Rv2982c) — requalified: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase cofC (Rv2983) — requalified: 2-phospho-L-lactate guanylyltransferase ppk1 (Rv2984) — requalified: RNA degradosome polyphosphate kinase mutT1 (Rv2985) — requalified: NUDIX hydrolase hupB (Rv2986c) — family_assigned: DNA-binding protein HupB leuD (Rv2987c) — family_assigned: 3-isopropylmalate dehydratase small subunit leuC (Rv2988c) — family_assigned: 3-isopropylmalate dehydratase large subunit Rv2989 (Rv2989) — family_assigned: IclR family transcriptional regulator Rv2990c (Rv2990c) — requalified: class I SAM-dependent methyltransferase Rv2991 (Rv2991) — requalified: PPOX class F420-dependent oxidoreductase leuB (Rv2995c) — requalified: 3-isopropylmalate dehydrogenase Rv2997 (Rv2997) — requalified: NAD(P)/FAD-dependent oxidoreductase 3 233 kb 3 260 kb 3 286 kb 3 312 kb 3 339 kb 3 366 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.