Genes
3906 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| Rv0794c Rv0794c |
- |
oxidoreductase | Oxidoreductase. Pfam: Pyr_redox_2 (PF07992.21), Pyr_redox (PF00070.34), Pyr_redox_dim (PF02852.29). | Pyr_redox_2 Pyr_redox Pyr_redox_dim |
Resolved |
| Rv0797 Rv0797 |
- |
insertion sequence element IS1547 transposase | Insertion sequence element IS1547 transposase. Pfam: DEDD_Tnp_IS110 (PF01548.24), Transposase_20 (PF02371.23). | DEDD_Tnp_IS110 Transposase_20 |
Resolved |
| cfp29 Rv0798c |
mtbc0_000847 |
hypothetical protein | Family 1 encapsulin nanocompartment shell protein. Pfam: Linocin_M18 (PF04454.19). | Linocin_M18 |
Resolved |
| Rv0799c Rv0799c |
mtbc0_000848 |
hypothetical protein | Dyp-type peroxidase. Pfam: Dyp_perox_N (PF04261.19), Dyp_perox_C (PF20628.4). | Dyp_perox_N Dyp_perox_C |
Resolved |
| pepC Rv0800 |
mtbc0_000849 |
M18 family aminopeptidase | M18 family aminopeptidase. Pfam: Peptidase_M18 (PF02127.21). | Peptidase_M18 |
Family assigned |
| Rv0801 Rv0801 |
mtbc0_000850 |
hypothetical protein | VOC family protein. Pfam: Glyoxalase_6 (PF18029.8), Glyoxalase (PF00903.32). | Glyoxalase_6 Glyoxalase |
Family assigned |
| Rv0802c Rv0802c |
mtbc0_000851 |
succinyl-CoA transferase | GNAT family protein. Pfam: Acetyltransf_3 (PF13302.14). | Acetyltransf_3 |
Family assigned |
| purL Rv0803 |
mtbc0_000852 |
phosphoribosylformylglycinamidine synthase 2 | Phosphoribosylformylglycinamidine synthase subunit PurL. Pfam: FGAR-AT_linker (PF18072.7), AIRS (PF00586.30), AIRS_C (PF02769.28). | FGAR-AT_linker AIRS AIRS_C |
Family assigned |
| Rv0804 Rv0804 |
mtbc0_000853 |
hypothetical protein | CPBP family intramembrane glutamic endopeptidase. Pfam: Rce1-like (PF02517.22). | Rce1-like |
Family assigned |
| cpdA Rv0805 |
mtbc0_000854 |
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | 3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA. Pfam: Metallophos (PF00149.34). | Metallophos |
Resolved |
| cpsY Rv0806c |
mtbc0_000855 |
exopolysaccharide phosphotransferase CpsY | Stealth family protein. Pfam: Stealth_CR1 (PF17101.11), Stealth_CR2 (PF11380.14), Stealth_CR3 (PF17102.11), Stealth_CR4 (PF17103.11). | Stealth_CR1 Stealth_CR2 Stealth_CR3 Stealth_CR4 |
Family assigned |
| Rv0807 Rv0807 |
mtbc0_000856 |
hypothetical protein | Sterol carrier family protein. Pfam: SCP_3 (PF17844.7). | SCP_3 |
Family assigned |
| purF Rv0808 |
- |
amidophosphoribosyltransferase | Amidophosphoribosyltransferase. Pfam: GATase_6 (PF13522.12), GATase_7 (PF13537.12), Pribosyltran (PF00156.34). | GATase_6 GATase_7 Pribosyltran |
Resolved |
| purM Rv0809 |
mtbc0_000858 |
phosphoribosylformylglycinamidine cyclo-ligase PurM | Phosphoribosylformylglycinamidine cyclo-ligase. Pfam: AIRS (PF00586.30), AIRS_C (PF02769.28). | AIRS AIRS_C |
Resolved |
| Rv0810c Rv0810c |
- |
hypothetical protein | Conserved hypothetical protein; DUF domain(s) DUF3073. Function unknown. | DUF3073 |
Still unknown |
| Rv0811c Rv0811c |
mtbc0_000860 |
hypothetical protein | Folate-binding protein YgfZ. | Family assigned | |
| Rv0812 Rv0812 |
- |
4-amino-4-deoxychorismate lyase | 4-amino-4-deoxychorismate lyase. Pfam: Aminotran_4 (PF01063.25). | Aminotran_4 |
Resolved |
| Rv0813c Rv0813c |
mtbc0_000862 |
hypothetical protein | FABP family protein. Pfam: THAP4_heme-bd (PF08768.18). | THAP4_heme-bd |
Family assigned |
| Rv0814c Rv0814c |
mtbc0_000863 |
hypothetical protein | DUF1416 domain-containing protein. Pfam: DUF1416 (PF07210.19), CarboxypepD_reg (PF13620.13). | DUF1416 CarboxypepD_reg |
Family assigned |
| cysA2 Rv0815c |
mtbc0_000864 |
thiosulfate sulfurtransferase CysA | Sulfurtransferase. Pfam: Rhodanese (PF00581.26). | Rhodanese |
Resolved |
| thiX Rv0816c |
mtbc0_000865 |
thioredoxin ThiX | Thioredoxin family protein. Pfam: Thioredoxin (PF00085.27). | Thioredoxin |
Family assigned |
| lmeA Rv0817c |
mtbc0_000866 |
hypothetical protein | Mannan chain length control protein LmeA. Pfam: LmeA (PF11209.14). | LmeA |
Resolved |
| Rv0818 Rv0818 |
mtbc0_000867 |
transcriptional regulator | Response regulator transcription factor. Pfam: GlnR_1st (PF21695.4), Trans_reg_C (PF00486.35). | GlnR_1st Trans_reg_C |
Resolved |
| mshD Rv0819 |
mtbc0_000868 |
mycothiol acetyltransferase | Mycothiol synthase. Pfam: Acetyltransf_1 (PF00583.32), Acetyltransf_7 (PF13508.14). | Acetyltransf_1 Acetyltransf_7 |
Resolved |
| phoT Rv0820 |
mtbc0_000869 |
phosphate ABC transporter ATP-binding protein PhoT | Phosphate ABC transporter ATP-binding protein PstB. Pfam: ABC_tran (PF00005.34). | ABC_tran |
Family assigned |
| phoY2 Rv0821c |
mtbc0_000870 |
phosphate-transport system transcriptional regulator PhoY2 | Phosphate signaling complex protein PhoU. Pfam: PhoU (PF01895.25). | PhoU |
Resolved |
| Rv0822c Rv0822c |
mtbc0_000871 |
hypothetical protein | LCP family protein. Pfam: LytR_cpsA_psr (PF03816.20), LytR_C (PF13399.12). | LytR_cpsA_psr LytR_C |
Family assigned |
| dusB Rv0823c |
mtbc0_000872 |
tRNA-dihydrouridine synthase | TRNA dihydrouridine synthase DusB. Pfam: Dus (PF01207.24). | Dus |
Resolved |
| desA1 Rv0824c |
- |
acyl-ACP desaturase DesA | Acyl-ACP desaturase DesA. Pfam: FA_desaturase_2 (PF03405.21). | FA_desaturase_2 |
Resolved |
| Rv0825c Rv0825c |
mtbc0_000874 |
hypothetical protein | TetR/AcrR family transcriptional regulator. Pfam: TetR_N (PF00440.30). | TetR_N |
Family assigned |
| Rv0826 Rv0826 |
mtbc0_000875 |
hypothetical protein | Oxygenase MpaB family protein. Pfam: MPAB_Lcp_cat (PF09995.16). | MPAB_Lcp_cat |
Family assigned |
| kmtR Rv0827c |
mtbc0_000876 |
HTH-type transcriptional regulator KmtR | Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor KmtR. Pfam: HTH_20 (PF12840.14), HTH_5 (PF01022.27), MarR_2 (PF12802.14), HTH_IclR (PF09339.17). | HTH_20 HTH_5 MarR_2 HTH_IclR |
Resolved |
| Rv0828c Rv0828c |
- |
deaminase | Deaminase. Pfam: dCMP_cyt_deam_1 (PF00383.30), MafB19-deam (PF14437.13). | dCMP_cyt_deam_1 MafB19-deam |
Resolved |
| Rv0830 Rv0830 |
mtbc0_000879 |
S-adenosylmethionine-dependent methyltransferase | Class I SAM-dependent methyltransferase. Pfam: LCM (PF04072.21). | LCM |
Resolved |
| Rv0831c Rv0831c |
mtbc0_000880 |
hypothetical protein | TIGR04255 family protein. | Family assigned | |
| PE_PGRS12 Rv0832 |
- |
PE-PGRS family protein PE_PGRS12 | PE-PGRS family protein PE_PGRS12. Pfam: PE (PF00934.26). | PE |
Family assigned |
| PE_PGRS13 Rv0833 |
- |
PE-PGRS family protein PE_PGRS13 | PE-PGRS family protein PE_PGRS13. | Family assigned | |
| PE_PGRS14 Rv0834c |
- |
PE-PGRS family protein PE_PGRS14 | PE-PGRS family protein PE_PGRS14. Pfam: PE (PF00934.26), PGRS (PF21526.3). | PE PGRS |
Family assigned |
| lpqQ Rv0835 |
mtbc0_000889 |
lipoprotein LpqQ | Sensor domain-containing protein. Pfam: PknH_C (PF14032.13). | PknH_C |
Family assigned |
| Rv0836c Rv0836c |
- |
hypothetical protein | No Pfam domain above threshold; Foldseek indicates a fold similar to 8an5-assembly1_B MenAT1 toxin-antitoxin complex (rv0078a-rv0078b) from Mycobacte (prob 1.00, TM 0.48). Structure-based, putative. | Family assigned | |
| Rv0837c Rv0837c |
mtbc0_000892 |
hypothetical protein | Type IV toxin-antitoxin system AbiEi family antitoxin. Pfam: AbiEi_2 (PF09952.15). | AbiEi_2 |
Family assigned |
| lpqR Rv0838 |
mtbc0_000893 |
lipoprotein LpqR | M15 family metallopeptidase. Pfam: Peptidase_M15 (PF01427.23). | Peptidase_M15 |
Family assigned |
| Rv0839 Rv0839 |
mtbc0_000894 |
hypothetical protein | Methyltransferase domain-containing protein. Pfam: Methyltransf_23 (PF13489.13), PCMT (PF01135.26), MetW (PF07021.19), Methyltransf_31 (PF13847.13), Ubie_methyltran (PF01209.25), MTS (PF05175.21), NodS (PF05401.17), Methyltransf_25 (PF13649.13), Methyltransf_11 (PF08241.19), Methyltransf_12 (PF08242.19). | Methyltransf_23 PCMT MetW Methyltransf_31 Ubie_methyltran MTS NodS Methyltransf_25 Methyltransf_11 Methyltransf_12 |
Family assigned |
| pip Rv0840c |
mtbc0_000895 |
proline iminopeptidase | Proline-specific peptidase family protein. Pfam: Abhydrolase_1 (PF00561.27), Abhydrolase_6 (PF12697.14). | Abhydrolase_1 Abhydrolase_6 |
Family assigned |
| Rv0841 Rv0841 |
- |
transmembrane protein | Transmembrane protein. | Resolved | |
| Rv0842 Rv0842 |
mtbc0_000897 |
integral membrane protein | MFS transporter. Pfam: MFS_1 (PF07690.22). | MFS_1 |
Resolved |
| Rv0843 Rv0843 |
mtbc0_000898 |
dehydrogenase | Thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha. Pfam: E1_dh (PF00676.26). | E1_dh |
Family assigned |
| narL Rv0844c |
mtbc0_000899 |
nitrate/nitrite response transcriptional regulator NarL | Two-component system response regulator NarL. Pfam: Response_reg (PF00072.31), GerE (PF00196.26). | Response_reg GerE |
Resolved |
| Rv0845 Rv0845 |
- |
sensor histidine kinase NarS | Sensor histidine kinase NarS. Pfam: HATPase_c (PF02518.32). | HATPase_c |
Resolved |
| mmcO Rv0846c |
mtbc0_000901 |
oxidase | Multicopper oxidase MmcO. Pfam: Cu-oxidase_3 (PF07732.22), Cu-oxidase (PF00394.29), Cu-oxidase_2 (PF07731.21). | Cu-oxidase_3 Cu-oxidase Cu-oxidase_2 |
Resolved |