MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 4 066 685–4 146 685 bp (80 000 bp)
+ strand − strand Rv3600c (Rv3600c) — requalified: type III pantothenate kinase panD (Rv3601c) — requalified: aspartate 1-decarboxylase panC (Rv3602c) — requalified: pantoate--beta-alanine ligase Rv3603c (Rv3603c) — family_assigned: Rossmann-like and DUF2520 domain-containing protein Rv3604c (Rv3604c) — dark: DUF6779 domain-containing protein Rv3605c (Rv3605c) — family_assigned: DUF3180 domain-containing protein folK (Rv3606c) — requalified: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphok folE (Rv3609c) — requalified: GTP cyclohydrolase I FolE ftsH (Rv3610c) — requalified: ATP-dependent zinc metalloprotease FtsH ftsH Rv3612c (Rv3612c) — dark: hypothetical protein Rv3613c (Rv3613c) — family_assigned: hypothetical protein espD (Rv3614c) — requalified: type VII secretion system ESX-1 target EspD espC (Rv3615c) — requalified: type VII secretion system ESX-1 filament-forming target EspC espA (Rv3616c) — requalified: type VII secretion system ESX-1 target EspA ephA (Rv3617) — requalified: epoxide hydrolase EphA Rv3618 (Rv3618) — requalified: LLM class flavin-dependent oxidoreductase esxI (Rv1037c) — requalified: type VII secretion system ESX-5 protein EsxL esxW (Rv3620c) — requalified: type VII secretion system protein EsxW lpqG (Rv3623) — family_assigned: SIMPL domain-containing protein hpt (Rv3624c) — requalified: hypoxanthine phosphoribosyltransferase mesJ (Rv3625c) — requalified: tRNA lysidine(34) synthetase TilS Rv3626c (Rv3626c) — requalified: zinc-dependent metalloprotease dacB (Rv3627c) — requalified: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endop ppa (Rv3628) — requalified: inorganic diphosphatase Rv3629c (Rv3629c) — family_assigned: DUF475 domain-containing protein Rv3630 (Rv3630) — family_assigned: hypothetical protein Rv3631 (Rv3631) — family_assigned: glycosyltransferase family 2 protein Rv3632 (Rv3632) — family_assigned: DUF2304 domain-containing protein Rv3633 (Rv3633) — family_assigned: phytanoyl-CoA dioxygenase family protein galE1 (Rv3634c) — requalified: UDP-glucose 4-epimerase Rv3635 (Rv3635) — family_assigned: hypothetical protein Rv3638 (Rv3638) — family_assigned: ATP-binding protein Rv3640c (Rv3640c) — family_assigned: IS256-like element IS1553 family transposase fic (Rv3641c) — family_assigned: Fic/DOC family protein Rv3642c (Rv3642c) — family_assigned: antitoxin VbhA family protein Rv3643 (Rv3643) — family_assigned: hypothetical protein Rv3644c (Rv3644c) — family_assigned: DNA polymerase III subunit delta' Rv3645 (Rv3645) — family_assigned: adenylate/guanylate cyclase domain-containing protein topA (Rv3646c) — requalified: type I DNA topoisomerase topA Rv3647c (Rv3647c) — family_assigned: hypothetical protein cspA (Rv3648c) — requalified: cold shock protein CspA Rv3649 (Rv3649) — requalified: DEAD/DEAH box helicase Rv3649 Rv3651 (Rv3651) — family_assigned: DUF5628 domain-containing protein Rv3655c (Rv3655c) — requalified: apoptosis inhibitor Rv3656c (Rv3656c) — dark: DUF4244 domain-containing protein Rv3658c (Rv3658c) — family_assigned: type II secretion system F family protein ssd (Rv3660c) — requalified: septum site-determining protein Ssd Rv3661 (Rv3661) — family_assigned: HAD-IB family hydrolase Rv3662c (Rv3662c) — requalified: oxidoreductase dppD (Rv3663c) — family_assigned: ABC transporter ATP-binding protein dppB (Rv3665c) — family_assigned: ABC transporter permease dppA (Rv3666c) — family_assigned: ABC transporter substrate-binding protein acs (Rv3667) — requalified: acetate--CoA ligase Rv3668c (Rv3668c) — requalified: protease Rv3669 (Rv3669) — family_assigned: phage holin family protein ephE (Rv3670) — family_assigned: alpha/beta hydrolase marP (Rv3671c) — requalified: acid resistance serine protease MarP Rv3672c (Rv3672c) — requalified: CoA pyrophosphatase nth (Rv3674c) — requalified: endonuclease III Rv3675 (Rv3675) — dark: hypothetical protein crp (Rv3676) — family_assigned: cAMP-activated global transcriptional regulator CRP Rv3677c (Rv3677c) — requalified: MBL fold metallo-hydrolase Rv3678c (Rv3678c) — family_assigned: RidA family protein Rv3679 (Rv3679) — family_assigned: ArsA family ATPase Rv3680 (Rv3680) — family_assigned: ArsA family ATPase whiB4 (Rv3681c) — family_assigned: transcriptional regulator WhiB4 4 077 kb 4 090 kb 4 104 kb 4 118 kb 4 131 kb 4 144 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.