MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 2 586 557–2 746 557 bp (160 000 bp)
+ strand − strand cdh (Rv2289) — requalified: CDP-diacylglycerol diphosphatase lppO (Rv2290) — requalified: lipoprotein LpqH sseB (Rv2291) — requalified: sulfurtransferase Rv2294 (Rv2294) — family_assigned: MalY/PatB family protein Rv2295 (Rv2295) — family_assigned: CbrC family protein Rv2296 (Rv2296) — requalified: haloalkane dehalogenase Rv2297 (Rv2297) — dark: hypothetical protein Rv2298 (Rv2298) — requalified: aldo/keto reductase htpG (Rv2299c) — requalified: molecular chaperone HtpG cut2 (Rv2301) — family_assigned: cutinase family protein Rv2302 (Rv2302) — family_assigned: DUF1918 domain-containing protein Rv2303c (Rv2303c) — family_assigned: amidohydrolase family protein Rv2304c (Rv2304c) — dark: hypothetical protein Rv2305 (Rv2305) — family_assigned: hypothetical protein Rv2307c (Rv2307c) — family_assigned: alpha/beta hydrolase Rv2308 (Rv2308) — family_assigned: DUF433 domain-containing protein Rv2312 (Rv2312) — dark: hypothetical protein Rv2313c (Rv2313c) — family_assigned: carboxymuconolactone decarboxylase family protein Rv2314c (Rv2314c) — family_assigned: TldD/PmbA family protein Rv2315c (Rv2315c) — family_assigned: TldD/PmbA family protein uspA (Rv2316) — family_assigned: sugar ABC transporter permease uspC (Rv2318) — family_assigned: sugar ABC transporter substrate-binding protein Rv2319c (Rv2319c) — requalified: universal stress protein rocE (Rv2320c) — requalified: amino acid permease Rv2324 (Rv2324) — family_assigned: Lrp/AsnC family transcriptional regulator Rv2325c (Rv2325c) — family_assigned: CbiQ family ECF transporter T component Rv2327 (Rv2327) — family_assigned: MarR family winged helix-turn-helix transcriptional regulato narK1 (Rv2329c) — requalified: nitrate/nitrite transporter lppP (Rv2330c) — family_assigned: LppP/LprE family lipoprotein Rv2331 (Rv2331) — family_assigned: hypothetical protein mez (Rv2332) — requalified: NAD-dependent malic enzyme stp (Rv2333c) — requalified: multidrug resistance protein Stp tyzA (Rv2336) — requalified: hypothetical protein tyzC (Rv2337c) — requalified: hypothetical protein moeW (Rv2338c) — family_assigned: ThiF family adenylyltransferase mmpL9 (Rv2339) — requalified: RND transporter MmpL9 cysE (Rv2335) — requalified: serine O-acetyltransferase lppQ (Rv2341) — dark: hypothetical protein Rv2342 (Rv2342) — family_assigned: hypothetical protein dnaG (Rv2343c) — requalified: DNA primase dgt (Rv2344c) — requalified: deoxyguanosinetriphosphate triphosphohydrolase Rv2345 (Rv2345) — family_assigned: TPM domain-containing protein esxO (Rv2346c) — requalified: type VII secretion system effector EsxO esxP (Rv2347c) — requalified: type VII secretion system ESX-5 protein EsxJ Rv2348c (Rv2348c) — family_assigned: hypothetical protein plcC (Rv2349c) — requalified: phospholipase C glyS (Rv2357c) — requalified: glycine--tRNA ligase smtB (Rv2358) — family_assigned: metalloregulator ArsR/SmtB family transcription factor zur (Rv2359) — requalified: zinc uptake transcriptional repressor Zur Rv2360c (Rv2360c) — family_assigned: hypothetical protein Rv2361c (Rv2361c) — requalified: decaprenyl diphosphate synthase recO (Rv2362c) — requalified: DNA repair protein RecO amiA2 (Rv2363) — requalified: amidase Rv2365c (Rv2365c) — requalified: cytidine deaminase Rv2366c (Rv2366c) — family_assigned: hemolysin family protein Rv2369c (Rv2369c) — dark: hypothetical protein Rv2370c (Rv2370c) — family_assigned: PucR family transcriptional regulator Rv2372c (Rv2372c) — requalified: 16S rRNA (uracil(1498)-N(3))-methyltransferase dnaJ2 (Rv2373c) — requalified: molecular chaperone DnaJ hrcA (Rv2374c) — requalified: heat-inducible transcriptional repressor HrcA Rv2375 (Rv2375) — family_assigned: type II toxin-antitoxin system VapB family antitoxin cfp2 (Rv2376c) — requalified: Low molecular weight antigen MTB12 mbtH (Rv2377c) — requalified: mycobactin NRPS accessory protein MbtH mbtG (Rv2378c) — requalified: NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtD (Rv2381c) — requalified: mycobactin polyketide synthase MbtD mbtC (Rv2382c) — requalified: polyketide synthetase MbtC mbtB (Rv2383c) — requalified: phenyloxazoline synthase MbtB mbtB mbtA (Rv2384) — requalified: bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase Mb Rv2387 (Rv2387) — family_assigned: sodium-dependent bicarbonate transport family permease rpfD (Rv2389c) — requalified: resuscitation-promoting factor protein RpfD Rv2390c (Rv2390c) — family_assigned: hypothetical protein cysH (Rv2392) — requalified: phosphoadenylyl-sulfate reductase ggtB (Rv2394) — family_assigned: gamma-glutamyltransferase family protein Rv2395 (Rv2395) — family_assigned: oligopeptide transporter%2C OPT family cysW (Rv2398c) — family_assigned: sulfate ABC transporter permease subunit CysW cysT (Rv2399c) — family_assigned: sulfate ABC transporter permease subunit CysT subI (Rv2400c) — family_assigned: sulfate ABC transporter substrate-binding protein Rv2401 (Rv2401) — dark: hypothetical protein lppR (Rv2403c) — family_assigned: sensor domain-containing protein lepA (Rv2404c) — requalified: translation elongation factor 4 Rv2406c (Rv2406c) — family_assigned: CBS domain-containing protein Rv2407 (Rv2407) — family_assigned: Rv2407 family type 3 sulfatase Rv2409c (Rv2409c) — family_assigned: transglutaminase family protein Rv2410c (Rv2410c) — family_assigned: alpha-E domain-containing protein Rv2411c (Rv2411c) — requalified: circularly permuted type 2 ATP-grasp protein rpsT (Rv2412) — requalified: 30S ribosomal protein S20 Rv2413c (Rv2413c) — family_assigned: DNA polymerase III subunit delta Rv2414c (Rv2414c) — family_assigned: ComEC/Rec2 family competence protein Rv2415c (Rv2415c) — family_assigned: ComEA family DNA-binding protein Rv2417c (Rv2417c) — family_assigned: DegV family protein octT (Rv2418c) — requalified: diglucosylglycerate octanoyltransferase gpgP (Rv2419c) — requalified: glucosyl-3-phosphoglycerate phosphatase rsfS (Rv2420c) — requalified: ribosome silencing factor Rv2422 (Rv2422) — family_assigned: hypothetical protein Rv2423 (Rv2423) — requalified: class I SAM-dependent methyltransferase Rv2425c (Rv2425c) — family_assigned: VWA domain-containing protein 2 597 kb 2 624 kb 2 650 kb 2 676 kb 2 703 kb 2 730 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.