Genes
3906 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| Rv0147 Rv0147 |
- |
aldehyde dehydrogenase | Aldehyde dehydrogenase. Pfam: Aldedh (PF00171.28). | Aldedh |
Resolved |
| Rv0148 Rv0148 |
mtbc0_000159 |
short-chain type dehydrogenase/reductase | SDR family oxidoreductase. Pfam: adh_short (PF00106.32), KR (PF08659.17), adh_short_C2 (PF13561.13). | adh_short KR adh_short_C2 |
Family assigned |
| Rv0149 Rv0149 |
mtbc0_000160 |
quinone oxidoreductase | NADPH:quinone oxidoreductase family protein. Pfam: ADH_N (PF08240.18), ADH_zinc_N (PF00107.33), ADH_zinc_N_2 (PF13602.13). | ADH_N ADH_zinc_N ADH_zinc_N_2 |
Family assigned |
| Rv0150c Rv0150c |
mtbc0_000161 |
hypothetical protein | Conserved hypothetical protein. No Pfam domain above threshold and no Foldseek structural hit on the ESMFold model: genuinely uncharacterised at both sequence and structure level. | Still unknown | |
| PE1 Rv0151c |
- |
PE family protein PE1 | PE family protein PE1. Pfam: PE (PF00934.26), PE-PPE (PF08237.18). | PE PE-PPE |
Family assigned |
| PE2 Rv0152c |
- |
PE family protein PE2 | PE family protein PE2. Pfam: PE-PPE (PF08237.18). | PE-PPE |
Family assigned |
| ptbB Rv0153c |
mtbc0_000164 |
phosphotyrosine protein phosphatase | Tyrosine-protein phosphatase PtbB. Pfam: Y_phosphatase3 (PF13350.12). | Y_phosphatase3 |
Resolved |
| fadE2 Rv0154c |
mtbc0_000165 |
acyl-CoA dehydrogenase FadE2 | Acyl-CoA dehydrogenase. Pfam: Acyl-CoA_dh_M (PF02770.25), Acyl-CoA_dh_1 (PF00441.30), Acyl-CoA_dh_2 (PF08028.17). | Acyl-CoA_dh_M Acyl-CoA_dh_1 Acyl-CoA_dh_2 |
Resolved |
| pntAa Rv0155 |
mtbc0_000167 |
NAD(P) transhydrogenase subunit alpha PntAa | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha. Pfam: AlaDh_PNT_N (PF05222.22), AlaDh_PNT_C (PF01262.28). | AlaDh_PNT_N AlaDh_PNT_C |
Family assigned |
| pntAb Rv0156 |
mtbc0_000168 |
NAD(P) transhydrogenase subunit alpha PntAb | NAD(P) transhydrogenase subunit alpha. Pfam: PNTB_4TM (PF12769.13). | PNTB_4TM |
Family assigned |
| pntB Rv0157 |
mtbc0_000169 |
NAD(P) transhydrogenase subunit beta PntB | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta. Pfam: PNTB (PF02233.23). | PNTB |
Family assigned |
| Rv0157A Rv0157A |
- |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. Foldseek best (non-significant) hit: 8w9z-assembly1_F The cryo-EM structure of the Nicotiana tabacum PEP-PA (prob 0.09, TM 0.77). | Still unknown | |
| Rv0158 Rv0158 |
mtbc0_000171 |
transcriptional regulator | TetR/AcrR family transcriptional regulator. Pfam: TetR_N (PF00440.30), TetR_C_24 (PF17932.7), TetR_C_5 (PF08360.16). | TetR_N TetR_C_24 TetR_C_5 |
Family assigned |
| PE3 Rv0159c |
- |
PE family protein PE3 | PE family protein PE3. Pfam: PE (PF00934.26), PE-PPE (PF08237.18). | PE PE-PPE |
Family assigned |
| PE4 Rv0160c |
- |
PE family protein PE4 | PE family protein PE4. Pfam: PE (PF00934.26), PE-PPE (PF08237.18). | PE PE-PPE |
Family assigned |
| Rv0161 Rv0161 |
mtbc0_000174 |
oxidoreductase | FAD-binding oxidoreductase. Pfam: FAD_binding_4 (PF01565.29), FAD-oxidase_C (PF02913.25). | FAD_binding_4 FAD-oxidase_C |
Resolved |
| adhE1 Rv0162c |
- |
zinc-type alcohol dehydrogenase subunit E | Zinc-type alcohol dehydrogenase subunit E. Pfam: ADH_N (PF08240.18), ADH_zinc_N (PF00107.33). | ADH_N ADH_zinc_N |
Family assigned |
| Rv0163 Rv0163 |
mtbc0_000176 |
hypothetical protein | Thioesterase of the hotdog-fold superfamily (Pfam 4HBT_2 PF13279 + 4HBT PF03061). Putative acyl-CoA / acyl-ACP thioesterase; the specific substrate is not established. | 4HBT_2 4HBT |
Family assigned |
| TB18.5 Rv0164 |
- |
hypothetical protein | Contains Polyketide_cyc2 (PF10604.16), Polyketide_cyc (PF03364.26) domain(s); putative function inferred from the domain architecture. | Polyketide_cyc2 Polyketide_cyc |
Family assigned |
| mce1R Rv0165c |
- |
transcriptional regulator Mce1R | Transcriptional regulator Mce1R. Pfam: GntR (PF00392.28), FCD (PF07729.18). | GntR FCD |
Family assigned |
| fadD5 Rv0166 |
mtbc0_000179 |
fatty-acid--CoA ligase FadD5 | Fatty-acid--CoA ligase FadD5. Pfam: AMP-binding (PF00501.35), AMP-binding_C (PF13193.13). | AMP-binding AMP-binding_C |
Resolved |
| yrbE1A Rv0167 |
mtbc0_000180 |
membrane protein | ABC transporter permease. Pfam: MlaE (PF02405.22). | MlaE |
Family assigned |
| yrbE1B Rv0168 |
mtbc0_000181 |
membrane protein | ABC transporter permease. Pfam: MlaE (PF02405.22). | MlaE |
Family assigned |
| mce1A Rv0169 |
- |
Mce family protein Mce1A | Mce family protein Mce1A. Pfam: MlaD (PF02470.26), Mce4_CUP1 (PF11887.14). | MlaD Mce4_CUP1 |
Family assigned |
| mce1B Rv0170 |
mtbc0_000183 |
Mce family protein Mce1B | Virulence factor Mce family protein. Pfam: MlaD (PF02470.26), Mce4_CUP1 (PF11887.14). | MlaD Mce4_CUP1 |
Family assigned |
| mce1C Rv0171 |
mtbc0_000184 |
Mce family protein Mce1C | MCE family protein. Pfam: MlaD (PF02470.26), Mce4_CUP1 (PF11887.14). | MlaD Mce4_CUP1 |
Family assigned |
| mce1D Rv0172 |
mtbc0_000185 |
Mce family protein Mce1D | Virulence factor Mce family protein. Pfam: MlaD (PF02470.26), Mce4_CUP1 (PF11887.14). | MlaD Mce4_CUP1 |
Family assigned |
| lprK Rv0173 |
mtbc0_000186 |
Mce family lipoprotein LprK | Virulence factor Mce family protein. Pfam: MlaD (PF02470.26), Mce4_CUP1 (PF11887.14). | MlaD Mce4_CUP1 |
Family assigned |
| mce1F Rv0174 |
mtbc0_000187 |
Mce family protein Mce1F | MCE family protein. Pfam: MlaD (PF02470.26), Mce4_CUP1 (PF11887.14). | MlaD Mce4_CUP1 |
Family assigned |
| Rv0175 Rv0175 |
mtbc0_000188 |
Mce associated membrane protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| Rv0176 Rv0176 |
mtbc0_000189 |
Mce associated transmembrane protein | RDD family protein. Pfam: RDD (PF06271.19). | RDD |
Family assigned |
| Rv0177 Rv0177 |
- |
Mce associated protein | Mce associated protein. | Resolved | |
| Rv0178 Rv0178 |
mtbc0_000191 |
Mce associated membrane protein | Mce associated membrane protein. | Resolved | |
| lprO Rv0179c |
mtbc0_000192 |
lipoprotein LprO | Phosphodiester glycosidase family protein. Pfam: NAGPA (PF09992.15). | NAGPA |
Family assigned |
| Rv0180c Rv0180c |
mtbc0_000193 |
transmembrane protein | YhgE/Pip domain-containing protein. Pfam: ABC2_membrane_3 (PF12698.14), DUF3533 (PF12051.15). | ABC2_membrane_3 DUF3533 |
Family assigned |
| Rv0181c Rv0181c |
mtbc0_000194 |
hypothetical protein | Pirin-family cupin metalloenzyme (Pfam Pirin PF02678 + Pirin_C_2 PF17954). A bicupin, often Fe-dependent (quercetinase / related dioxygenase chemistry); specific substrate not established. | Pirin Pirin_C_2 |
Family assigned |
| sigG Rv0182c |
mtbc0_000195 |
ECF RNA polymerase sigma factor SigG | Sigma-70 family RNA polymerase sigma factor SigG. Pfam: Sigma70_r2 (PF04542.21), Sigma70_r4_2 (PF08281.19), Sigma70_r4 (PF04545.23), SnoaL_4 (PF13577.13), SnoaL_2 (PF12680.14). | Sigma70_r2 Sigma70_r4_2 Sigma70_r4 SnoaL_4 SnoaL_2 |
Family assigned |
| Rv0183 Rv0183 |
mtbc0_000196 |
lysophospholipase | Monoacylglycerol lipase. Pfam: Hydrolase_4 (PF12146.16), Abhydrolase_1 (PF00561.27), Abhydrolase_6 (PF12697.14). | Hydrolase_4 Abhydrolase_1 Abhydrolase_6 |
Resolved |
| Rv0184 Rv0184 |
mtbc0_000197 |
hypothetical protein | Conserved hypothetical protein; tandem DUF2786 + DUF7168 domains (Pfam), both of unknown function. | DUF2786 DUF7168 |
Still unknown |
| Rv0185 Rv0185 |
mtbc0_000198 |
hypothetical protein | Putative metallohydrolase (PGAP TIGR04338 family). No Pfam domain above threshold, but Foldseek weakly matches an M61-type aminopeptidase fold: a possible metal-dependent hydrolase/peptidase, not firmly assigned. | Family assigned | |
| bglS Rv0186 |
- |
beta-glucosidase BglS | Beta-glucosidase BglS. Pfam: Glyco_hydro_3 (PF00933.28), Glyco_hydro_3_C (PF01915.28), Fn3-like (PF14310.13). | Glyco_hydro_3 Glyco_hydro_3_C Fn3-like |
Resolved |
| mymT Rv0186A |
- |
metallothionein | Metallothionein. | Resolved | |
| Rv0187 Rv0187 |
mtbc0_000201 |
O-methyltransferase | O-methyltransferase. Pfam: Methyltransf_3 (PF01596.24), PCMT (PF01135.26), Methyltransf_31 (PF13847.13), Methyltransf_25 (PF13649.13), Methyltransf_24 (PF13578.13), Methyltransf_11 (PF08241.19). | Methyltransf_3 PCMT Methyltransf_31 Methyltransf_25 Methyltransf_24 Methyltransf_11 |
Resolved |
| Rv0188 Rv0188 |
mtbc0_000202 |
transmembrane protein | SPW repeat protein. Pfam: SPW (PF03779.21). | SPW |
Resolved |
| ilvD Rv0189c |
mtbc0_000203 |
dihydroxy-acid dehydratase | Dihydroxy-acid dehydratase. Pfam: ILVD_EDD_N (PF00920.28), ILV_EDD_C (PF24877.2). | ILVD_EDD_N ILV_EDD_C |
Resolved |
| Rv0190 Rv0190 |
mtbc0_000204 |
hypothetical protein | Metal-sensing transcriptional regulator (Pfam Trns_repr_metal PF02583; CsoR/RcnR-like). Putative metalloregulator controlling metal-homeostasis genes in response to metal ions. | Trns_repr_metal |
Family assigned |
| Rv0191 Rv0191 |
mtbc0_000205 |
MFS-type transporter | Rv0191 family MFS efflux transporter. Pfam: MFS_1 (PF07690.22). | MFS_1 |
Family assigned |
| Rv0192 Rv0192 |
- |
hypothetical protein | Contains Big_10 (PF17964.8), YkuD (PF03734.20) domain(s); putative function inferred from the domain architecture. | Big_10 YkuD |
Family assigned |
| Rv0193c Rv0193c |
mtbc0_000207 |
hypothetical protein | Putative 2-oxoglutarate / Fe(II)-dependent oxygenase. No Pfam domain above threshold, but Foldseek gives a significant match to a proline-hydroxylase (2OG-Fe(II) oxygenase) fold (prob 1.00, E=1e-4, TM=0.57). Structure-based hypothesis. | Family assigned | |
| Rv0194 Rv0194 |
mtbc0_000208 |
multidrug ABC transporter ATPase/permease | ABC transporter ATP-binding protein. Pfam: ABC_membrane (PF00664.29), ABC_tran (PF00005.34). | ABC_membrane ABC_tran |
Family assigned |