MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 3 447 709–3 527 709 bp (80 000 bp)
+ strand − strand ligB (Rv3062) — requalified: ATP-dependent DNA ligase cstA (Rv3063) — family_assigned: carbon starvation CstA family protein cstA Rv3064c (Rv3064c) — family_assigned: DoxX family protein Rv3066 (Rv3066) — family_assigned: TetR/AcrR family transcriptional regulator pgmA (Rv3068c) — requalified: phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-depen crcB (Rv3069) — requalified: fluoride efflux transporter CrcB crcB (Rv3070) — requalified: fluoride efflux transporter CrcB Rv3071 (Rv3071) — family_assigned: DUF190 domain-containing protein Rv3073c (Rv3073c) — dark: DUF488 domain-containing protein Rv3074 (Rv3074) — family_assigned: DUF222 domain-containing protein Rv3075c (Rv3075c) — requalified: CoA ester lyase Rv3076 (Rv3076) — family_assigned: SRPBCC family protein hab (Rv3078) — requalified: hydrogenase Rv3079c (Rv3079c) — requalified: LLM class F420-dependent oxidoreductase pknK (Rv3080c) — requalified: serine/threonine protein kinase PknK pknK Rv3081 (Rv3081) — requalified: nucleotidyltransferase virS (Rv3082c) — family_assigned: AraC family transcriptional regulator Rv3083 (Rv3083) — requalified: NAD(P)/FAD-dependent oxidoreductase lipR (Rv3084) — family_assigned: alpha/beta hydrolase Rv3085 (Rv3085) — family_assigned: SDR family NAD(P)-dependent oxidoreductase adhD (Rv3086) — requalified: NDMA-dependent alcohol dehydrogenase Rv3087 (Rv3087) — family_assigned: wax ester/triacylglycerol synthase family O-acyltransferase tgs4 (Rv3088) — family_assigned: wax ester/triacylglycerol synthase family O-acyltransferase fadD13 (Rv3089) — requalified: long-chain-fatty-acid--CoA ligase FadD13 Rv3090 (Rv3090) — family_assigned: SPFH domain-containing protein Rv3091 (Rv3091) — family_assigned: patatin-like phospholipase family protein Rv3092c (Rv3092c) — family_assigned: DUF808 domain-containing protein Rv3093c (Rv3093c) — requalified: LLM class F420-dependent oxidoreductase Rv3094c (Rv3094c) — family_assigned: acyl-CoA dehydrogenase family protein Rv3095 (Rv3095) — family_assigned: helix-turn-helix domain-containing protein Rv3096 (Rv3096) — requalified: 1%2C4-beta-xylanase Rv3098c (Rv3098c) — dark: hypothetical protein Rv3099c (Rv3099c) — family_assigned: maleylpyruvate isomerase family mycothiol-dependent enzyme smpB (Rv3100c) — family_assigned: SsrA-binding protein SmpB ftsX (Rv3101c) — requalified: permease-like cell division protein FtsX ftsE (Rv3102c) — family_assigned: cell division ATP-binding protein FtsE Rv3103c (Rv3103c) — dark: hypothetical protein Rv3104c (Rv3104c) — family_assigned: mechanosensitive ion channel family protein fprA (Rv3106) — requalified: ferredoxin--NADP(+) reductase FprA agpS (Rv3107c) — requalified: FAD-binding oxidoreductase Rv3113 (Rv3113) — family_assigned: HAD family hydrolase Rv3114 (Rv3114) — requalified: nucleoside deaminase Rv1199c (Rv1199c) — family_assigned: IS256-like element IS1081 family transposase cysA2 (Rv0815c) — requalified: sulfurtransferase Rv0814c (Rv0814c) — family_assigned: DUF1416 domain-containing protein Rv3120 (Rv3120) — requalified: class I SAM-dependent methyltransferase cyp141 (Rv3121) — requalified: cytochrome P450 Cyp141 Rv3123 (Rv3123) — family_assigned: hypothetical protein moaR1 (Rv3124) — family_assigned: transcriptional regulator MoaR1 Rv3127 (Rv3127) — requalified: NAD(P)H nitroreductase tgs1 (Rv3130c) — requalified: diacylglycerol O-acyltransferase Rv3131 (Rv3131) — requalified: NAD(P)H nitroreductase devS (Rv3132c) — requalified: two-component system sensor histidine kinase DevS devR (Rv3133c) — requalified: two-component system response regulator DevR Rv3134c (Rv3134c) — requalified: universal stress protein hisN (Rv3137) — requalified: histidinol-phosphatase pflA (Rv3138) — requalified: AmmeMemoRadiSam system radical SAM enzyme 3 456 kb 3 470 kb 3 483 kb 3 496 kb 3 510 kb 3 524 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.