Genes
3906 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| lpqS Rv0847 |
mtbc0_000902 |
lipoprotein LpqS | Lipoprotein LpqS. Pfam: LpqS (PF26327.1). | LpqS |
Resolved |
| cysK2 Rv0848 |
- |
cysteine synthase CysK | Cysteine synthase CysK. Pfam: PALP (PF00291.32). | PALP |
Resolved |
| Rv0849 Rv0849 |
mtbc0_000904 |
MFS-type transporter | MFS transporter. Pfam: MFS_1 (PF07690.22). | MFS_1 |
Resolved |
| Rv0851c Rv0851c |
mtbc0_000906 |
short-chain type dehydrogenase/reductase | SDR family NAD(P)-dependent oxidoreductase. Pfam: adh_short (PF00106.32), KR (PF08659.17), adh_short_C2 (PF13561.13). | adh_short KR adh_short_C2 |
Family assigned |
| Rv0852 Rv0852 |
mtbc0_000907 |
hypothetical protein | Fatty-acid--CoA ligase. | Resolved | |
| pdc Rv0853c |
mtbc0_000908 |
alpha-keto-acid decarboxylase | Alpha-keto-acid decarboxylase. Pfam: TPP_enzyme_N (PF02776.24), TPP_enzyme_M (PF00205.29), TPP_enzyme_C (PF02775.27). | TPP_enzyme_N TPP_enzyme_M TPP_enzyme_C |
Resolved |
| Rv0854 Rv0854 |
mtbc0_000909 |
hypothetical protein | SRPBCC family protein. Pfam: Polyketide_cyc2 (PF10604.16), Polyketide_cyc (PF03364.26). | Polyketide_cyc2 Polyketide_cyc |
Family assigned |
| far Rv0855 |
mtbc0_000910 |
fatty-acid-CoA racemase | Fatty-acid-CoA racemase. Pfam: CoA_transf_3 (PF02515.23). | CoA_transf_3 |
Resolved |
| Rv0856 Rv0856 |
- |
hypothetical protein | Contains Polyketide_cyc (PF03364.26) domain(s); putative function inferred from the domain architecture. | Polyketide_cyc |
Family assigned |
| Rv0857 Rv0857 |
- |
hypothetical protein | Contains Polyketide_cyc2 (PF10604.16), Polyketide_cyc (PF03364.26) domain(s); putative function inferred from the domain architecture. | Polyketide_cyc2 Polyketide_cyc |
Family assigned |
| dapC Rv0858c |
mtbc0_000913 |
N-succinyldiaminopimelate aminotransferase DapC | Pyridoxal phosphate-dependent aminotransferase. Pfam: Aminotran_1_2 (PF00155.28), Aminotran_5 (PF00266.26). | Aminotran_1_2 Aminotran_5 |
Resolved |
| fadA Rv0859 |
mtbc0_000914 |
acyltransferase | Acetyl-CoA C-acetyltransferase. Pfam: Thiolase_N (PF00108.30), ketoacyl-synt (PF00109.33), Thiolase_C (PF02803.25). | Thiolase_N ketoacyl-synt Thiolase_C |
Resolved |
| fadB Rv0860 |
mtbc0_000915 |
fatty oxidation protein FadB | Fatty oxidation protein FadB. Pfam: ECH_1 (PF00378.26), ECH_2 (PF16113.11), 3HCDH_N (PF02737.25), 3HCDH (PF00725.28). | ECH_1 ECH_2 3HCDH_N 3HCDH |
Resolved |
| ercc3 Rv0861c |
- |
DNA helicase Ercc3 | DNA helicase Ercc3. Pfam: Helicase_C_3 (PF13625.12), ResIII (PF04851.22), DEAD (PF00270.36), ERCC3_RAD25_C (PF16203.12), Helicase_C (PF00271.38). | Helicase_C_3 ResIII DEAD ERCC3_RAD25_C Helicase_C |
Resolved |
| Rv0862c Rv0862c |
mtbc0_000917 |
hypothetical protein | Helicase-associated domain-containing protein. Pfam: Helicase_C_3 (PF13625.12). | Helicase_C_3 |
Family assigned |
| Rv0863 Rv0863 |
mtbc0_000918 |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| moaC2 Rv0864 |
mtbc0_000919 |
cyclic pyranopterin monophosphate synthase accessory protein | Cyclic pyranopterin monophosphate synthase MoaC. Pfam: MoaC (PF01967.28). | MoaC |
Resolved |
| mog Rv0865 |
mtbc0_000920 |
molybdopterin biosynthesis protein | MogA/MoaB family molybdenum cofactor biosynthesis protein. Pfam: MoCF_biosynth (PF00994.30). | MoCF_biosynth |
Family assigned |
| moaE2 Rv0866 |
mtbc0_000921 |
molybdopterin synthase catalytic subunit 2 | Molybdopterin synthase subunit MoaE2. Pfam: MoaE (PF02391.23). | MoaE |
Family assigned |
| rpfA Rv0867c |
mtbc0_000922 |
resuscitation-promoting factor RpfA | Resuscitation-promoting factor protein RpfA. Pfam: Transglycosylas (PF06737.20). | Transglycosylas |
Resolved |
| moaD2 Rv0868c |
mtbc0_000923 |
cyclic pyranopterin monophosphate synthase | Molybdopterin synthase subunit MoaD2. Pfam: ThiS (PF02597.27). | ThiS |
Family assigned |
| moaA2 Rv0869c |
mtbc0_000924 |
molybdenum cofactor biosynthesis protein MoaA | GTP 3'%2C8-cyclase MoaA. Pfam: Radical_SAM (PF04055.28), Mob_synth_C (PF06463.19). | Radical_SAM Mob_synth_C |
Resolved |
| Rv0870c Rv0870c |
mtbc0_000925 |
integral membrane protein | YccF domain-containing protein. Pfam: YccF (PF03733.19). | YccF |
Family assigned |
| cspB Rv0871 |
mtbc0_000926 |
cold shock-like protein CspB | Cold-shock protein. Pfam: CSD (PF00313.29). | CSD |
Resolved |
| PE_PGRS15 Rv0872c |
- |
PE-PGRS family protein PE_PGRS15 | PE-PGRS family protein PE_PGRS15. Pfam: PE (PF00934.26), PGRS (PF21526.3). | PE PGRS |
Family assigned |
| fadE10 Rv0873 |
mtbc0_000928 |
acyl-CoA dehydrogenase | Acyl-CoA dehydrogenase family protein. Pfam: Acyl-CoA_dh_N (PF02771.22), Acyl-CoA_dh_M (PF02770.25), Acyl-CoA_dh_1 (PF00441.30), Acyl-CoA_dh_2 (PF08028.17). | Acyl-CoA_dh_N Acyl-CoA_dh_M Acyl-CoA_dh_1 Acyl-CoA_dh_2 |
Family assigned |
| Rv0874c Rv0874c |
mtbc0_000929 |
hypothetical protein | FIST C-terminal domain-containing protein. Pfam: FIST (PF08495.16), FIST_C (PF10442.15). | FIST FIST_C |
Family assigned |
| Rv0875c Rv0875c |
mtbc0_000930 |
hypothetical protein | Conserved hypothetical protein; DUF domain(s) DUF2771. Function unknown. Foldseek best (non-significant) hit: 6d0k-assembly1_D Crystal structure of a CLC-type fluoride/proton antip (prob 0.60, TM 0.45). | DUF2771 |
Still unknown |
| Rv0876c Rv0876c |
mtbc0_000931 |
transmembrane protein | MFS transporter. Pfam: MFS_1 (PF07690.22). | MFS_1 |
Resolved |
| Rv0877 Rv0877 |
mtbc0_000932 |
hypothetical protein | Conserved hypothetical protein; DUF domain(s) DUF3027. Function unknown. Foldseek best (non-significant) hit: 5kuy-assembly1_G Influenza hemagglutinin H3 A/Hong Kong/1/1968 in comp (prob 0.66, TM 0.50). | DUF3027 |
Still unknown |
| PPE13 Rv0878c |
- |
PPE family protein PPE13 | PPE family protein PPE13. Pfam: PPE (PF00823.26), Pentapeptide_2 (PF01469.25). | PPE Pentapeptide_2 |
Family assigned |
| Rv0879c Rv0879c |
mtbc0_000934 |
transmembrane protein | Conserved hypothetical protein; DUF domain(s) DUF2530. Function unknown. | DUF2530 |
Still unknown |
| Rv0880 Rv0880 |
mtbc0_000935 |
HTH-type transcriptional regulator | MarR family transcriptional regulator. Pfam: MarR_2 (PF12802.14), MarR (PF01047.29). | MarR_2 MarR |
Family assigned |
| Rv0881 Rv0881 |
mtbc0_000936 |
tRNA/rRNA methyltransferase | RNA methyltransferase. Pfam: SpoU_methylase (PF00588.25). | SpoU_methylase |
Resolved |
| Rv0882 Rv0882 |
mtbc0_000937 |
transmembrane protein | Conserved hypothetical protein; DUF domain(s) DUF2537. Function unknown. | DUF2537 |
Still unknown |
| sepH Rv0883c |
mtbc0_000938 |
hypothetical protein | Septation protein SepH. | DUF3071 |
Resolved |
| serC Rv0884c |
mtbc0_000939 |
phosphoserine aminotransferase | Phosphoserine transaminase. Pfam: Aminotran_5 (PF00266.26). | Aminotran_5 |
Resolved |
| Rv0885 Rv0885 |
mtbc0_000940 |
hypothetical protein | Diiron oxygenase. Pfam: AurF (PF11583.15). | AurF |
Resolved |
| fprB Rv0886 |
mtbc0_000941 |
ferredoxin/ferredoxin--NADP reductase | FAD-dependent oxidoreductase. Pfam: Fer4 (PF00037.33), Pyr_redox_2 (PF07992.21), NAD_binding_8 (PF13450.13). | Fer4 Pyr_redox_2 NAD_binding_8 |
Resolved |
| Rv0887c Rv0887c |
mtbc0_000942 |
hypothetical protein | VOC family protein. Pfam: Glyoxalase (PF00903.32), Glyoxalase_6 (PF18029.8). | Glyoxalase Glyoxalase_6 |
Family assigned |
| spmT Rv0888 |
mtbc0_000943 |
hypothetical protein | Sphingomyelinase. Pfam: Big_9 (PF17963.8), Exo_endo_phos (PF03372.30). | Big_9 Exo_endo_phos |
Resolved |
| citA Rv0889c |
mtbc0_000944 |
citrate synthase 2 | Citrate synthase 2. Pfam: Citrate_synt (PF00285.27). | Citrate_synt |
Resolved |
| Rv0890c Rv0890c |
- |
HTH-type transcriptional regulator | HTH-type transcriptional regulator. Pfam: HTH_77 (PF25872.1), GerE (PF00196.26), Sigma70_r4_2 (PF08281.19). | HTH_77 GerE Sigma70_r4_2 |
Family assigned |
| Rv0891c Rv0891c |
- |
hypothetical protein | Contains Guanylate_cyc (PF00211.26) domain(s); putative function inferred from the domain architecture. | Guanylate_cyc |
Family assigned |
| Rv0892 Rv0892 |
mtbc0_000946 |
monooxygenase | NAD(P)/FAD-dependent oxidoreductase. Pfam: Pyr_redox_2 (PF07992.21), FMO-like (PF00743.26), Pyr_redox_3 (PF13738.13), NAD_binding_8 (PF13450.13). | Pyr_redox_2 FMO-like Pyr_redox_3 NAD_binding_8 |
Resolved |
| Rv0893c Rv0893c |
mtbc0_000947 |
S-adenosylmethionine-dependent methyltransferase | Class I SAM-dependent methyltransferase. Pfam: LCM (PF04072.21). | LCM |
Resolved |
| Rv0894 Rv0894 |
mtbc0_000948 |
transcriptional regulator | Contains HTH_77 (PF25872.1) domain(s); putative function inferred from the domain architecture. | HTH_77 |
Family assigned |
| Rv0895 Rv0895 |
- |
diacyglycerol O-acyltransferase | Diacyglycerol O-acyltransferase. Pfam: WS_DGAT_cat (PF03007.22), WS_DGAT_C (PF06974.19). | WS_DGAT_cat WS_DGAT_C |
Resolved |
| gltA2 Rv0896 |
mtbc0_000950 |
citrate synthase 1 | Citrate synthase. Pfam: Citrate_synt (PF00285.27). | Citrate_synt |
Resolved |
| Rv0897c Rv0897c |
mtbc0_000951 |
oxidoreductase | NAD(P)/FAD-dependent oxidoreductase. Pfam: FAD_binding_3 (PF01494.26), Thi4 (PF01946.24), FAD_oxidored (PF12831.14), GIDA (PF01134.29), FAD_binding_2 (PF00890.31), NAD_binding_8 (PF13450.13). | FAD_binding_3 Thi4 FAD_oxidored GIDA FAD_binding_2 NAD_binding_8 |
Resolved |