Genes
3906 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| moaA1 Rv3109 |
- |
cyclic pyranopterin monophosphate synthase | Cyclic pyranopterin monophosphate synthase. Pfam: Radical_SAM (PF04055.28), Mob_synth_C (PF06463.19). | Radical_SAM Mob_synth_C |
Resolved |
| moaB1 Rv3110 |
- |
pterin-4-alpha-carbinolamine dehydratase | Pterin-4-alpha-carbinolamine dehydratase. Pfam: Pterin_4a (PF01329.25). | Pterin_4a |
Resolved |
| moaC1 Rv3111 |
- |
cyclic pyranopterin monophosphate synthase accessory protein | Cyclic pyranopterin monophosphate synthase accessory protein. Pfam: MoaC (PF01967.28). | MoaC |
Resolved |
| moaD1 Rv3112 |
- |
molybdenum cofactor biosynthesis protein MoaD | Molybdenum cofactor biosynthesis protein MoaD. Pfam: ThiS (PF02597.27). | ThiS |
Resolved |
| Rv3113 Rv3113 |
mtbc0_003309 |
phosphatase | HAD family hydrolase. Pfam: Hydrolase (PF00702.33), HAD_2 (PF13419.13), Hydrolase_like (PF13242.13). | Hydrolase HAD_2 Hydrolase_like |
Family assigned |
| Rv3114 Rv3114 |
mtbc0_003310 |
hypothetical protein | Nucleoside deaminase. Pfam: dCMP_cyt_deam_1 (PF00383.30), MafB19-deam (PF14437.13). | dCMP_cyt_deam_1 MafB19-deam |
Resolved |
| Rv3115 Rv3115 |
- |
transposase | Transposase. Pfam: Transposase_mut (PF00872.25). | Transposase_mut |
Resolved |
| moeB2 Rv3116 |
- |
molybdenum cofactor biosynthesis protein MoeB | Molybdenum cofactor biosynthesis protein MoeB. Pfam: ThiF (PF00899.28), Rhodanese (PF00581.26). | ThiF Rhodanese |
Resolved |
| cysA3 Rv3117 |
- |
thiosulfate sulfurtransferase | Thiosulfate sulfurtransferase. Pfam: Rhodanese (PF00581.26). | Rhodanese |
Resolved |
| Rv3118 Rv3118 |
- |
hypothetical protein | Contains DUF1416 (PF07210.19), CarboxypepD_reg (PF13620.13) domain(s); putative function inferred from the domain architecture. | DUF1416 CarboxypepD_reg |
Family assigned |
| moaE1 Rv3119 |
- |
molybdopterin synthase catalytic subunit 1 | Molybdopterin synthase catalytic subunit 1. Pfam: MoaE (PF02391.23). | MoaE |
Family assigned |
| Rv3120 Rv3120 |
mtbc0_003316 |
hypothetical protein | Class I SAM-dependent methyltransferase. Pfam: Methyltransf_25 (PF13649.13), Methyltransf_11 (PF08241.19). | Methyltransf_25 Methyltransf_11 |
Resolved |
| cyp141 Rv3121 |
mtbc0_003317 |
cytochrome P450 Cyp141 | Cytochrome P450 Cyp141. Pfam: p450 (PF00067.28). | p450 |
Resolved |
| Rv3122 Rv3122 |
- |
hypothetical protein | Conserved hypothetical protein; DUF domain(s) DUF6788. Function unknown. Foldseek best (non-significant) hit: 2w9j-assembly1_A The crystal structure of SRP14 from the Schizosacchar (prob 0.41, TM 0.31). | DUF6788 |
Still unknown |
| Rv3123 Rv3123 |
mtbc0_003320 |
hypothetical protein | Transposase of an insertion sequence / mobile element (eggNOG COG3464). A mobile-element function, not a host-metabolic gene. | Family assigned | |
| moaR1 Rv3124 |
mtbc0_003321 |
transcriptional regulator MoaR | Transcriptional regulator MoaR1. Pfam: Trans_reg_C (PF00486.35), BTAD (PF03704.24). | Trans_reg_C BTAD |
Family assigned |
| PPE49 Rv3125c |
- |
PPE family protein PPE49 | PPE family protein PPE49. Pfam: PPE (PF00823.26), PPE-SVP (PF12484.14). | PPE PPE-SVP |
Family assigned |
| Rv3126c Rv3126c |
- |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| Rv3127 Rv3127 |
mtbc0_003323 |
hypothetical protein | NAD(P)H nitroreductase. | Resolved | |
| tgs1 Rv3130c |
mtbc0_003327 |
diacyglycerol O-acyltransferase | Diacylglycerol O-acyltransferase. Pfam: WS_DGAT_cat (PF03007.22), WS_DGAT_C (PF06974.19). | WS_DGAT_cat WS_DGAT_C |
Resolved |
| Rv3131 Rv3131 |
mtbc0_003328 |
NAD(P)H nitroreductase | NAD(P)H nitroreductase. | Resolved | |
| devS Rv3132c |
mtbc0_003329 |
two component sensor histidine kinase DevS | Two-component system sensor histidine kinase DevS. Pfam: GAF_2 (PF13185.13), GAF (PF01590.33), GAF_3 (PF13492.13), HisKA_3 (PF07730.20), HATPase_c (PF02518.32). | GAF_2 GAF GAF_3 HisKA_3 HATPase_c |
Resolved |
| devR Rv3133c |
mtbc0_003330 |
two component transcriptional regulator DevR | Two-component system response regulator DevR. Pfam: Response_reg (PF00072.31), GerE (PF00196.26). | Response_reg GerE |
Resolved |
| Rv3134c Rv3134c |
mtbc0_003331 |
universal stress protein | Universal stress protein. Pfam: Usp (PF00582.33). | Usp |
Resolved |
| PPE50 Rv3135 |
- |
PPE family protein PPE50 | PPE family protein PPE50. Pfam: PPE (PF00823.26). | PPE |
Family assigned |
| PPE51 Rv3136 |
- |
PPE family protein PPE51 | PPE family protein PPE51. Pfam: PPE (PF00823.26), PPE-SVP (PF12484.14). | PPE PPE-SVP |
Family assigned |
| Rv3136A Rv3136A |
- |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. Foldseek best (non-significant) hit: 7d8r-assembly2_C MITF HLHLZ structure (prob 0.41, TM 0.32). | Still unknown | |
| hisN Rv3137 |
mtbc0_003335 |
histidinol-phosphatase | Histidinol-phosphatase. Pfam: Inositol_P (PF00459.31). | Inositol_P |
Resolved |
| pflA Rv3138 |
mtbc0_003336 |
pyruvate formate lyase activating protein PflA | AmmeMemoRadiSam system radical SAM enzyme. Pfam: Radical_SAM (PF04055.28). | Radical_SAM |
Resolved |
| fadE24 Rv3139 |
mtbc0_003337 |
acyl-CoA dehydrogenase | Acyl-CoA dehydrogenase family protein. Pfam: Acyl-CoA_dh_N (PF02771.22), Acyl-CoA_dh_M (PF02770.25), Acyl-CoA_dh_1 (PF00441.30), Acyl-CoA_dh_2 (PF08028.17). | Acyl-CoA_dh_N Acyl-CoA_dh_M Acyl-CoA_dh_1 Acyl-CoA_dh_2 |
Family assigned |
| fadE23 Rv3140 |
mtbc0_003338 |
acyl-CoA dehydrogenase FadE23 | Acyl-CoA dehydrogenase family protein. Pfam: Acyl-CoA_dh_M (PF02770.25), Acyl-CoA_dh_1 (PF00441.30), Acyl-CoA_dh_2 (PF08028.17). | Acyl-CoA_dh_M Acyl-CoA_dh_1 Acyl-CoA_dh_2 |
Family assigned |
| fadB4 Rv3141 |
mtbc0_003339 |
NADPH quinone oxidoreductase FadB | NADPH:quinone oxidoreductase family protein. Pfam: ADH_N (PF08240.18), ADH_zinc_N (PF00107.33), ADH_zinc_N_2 (PF13602.13). | ADH_N ADH_zinc_N ADH_zinc_N_2 |
Family assigned |
| Rv3142c Rv3142c |
mtbc0_003340 |
hypothetical protein | DUF6188 family protein. | DUF6188 |
Family assigned |
| Rv3143 Rv3143 |
mtbc0_003341 |
response regulator | Response regulator. | Resolved | |
| PPE52 Rv3144c |
- |
PPE family protein PPE52 | PPE family protein PPE52. Pfam: PPE (PF00823.26). | PPE |
Family assigned |
| nuoA Rv3145 |
mtbc0_003343 |
NADH-quinone oxidoreductase subunit A | NADH-quinone oxidoreductase subunit A. Pfam: Oxidored_q4 (PF00507.25). | Oxidored_q4 |
Family assigned |
| nuoB Rv3146 |
- |
NADH-quinone oxidoreductase subunit B | NADH-quinone oxidoreductase subunit B. Pfam: Oxidored_q6 (PF01058.30). | Oxidored_q6 |
Family assigned |
| nuoC Rv3147 |
mtbc0_003345 |
NADH-quinone oxidoreductase subunit C | NADH-quinone oxidoreductase subunit C. Pfam: Complex1_30kDa (PF00329.26). | Complex1_30kDa |
Family assigned |
| nuoD Rv3148 |
mtbc0_003346 |
NADH-quinone oxidoreductase subunit D | NADH dehydrogenase (quinone) subunit D. Pfam: Complex1_49kDa (PF00346.25). | Complex1_49kDa |
Family assigned |
| nuoE Rv3149 |
mtbc0_003347 |
NADH-quinone oxidoreductase subunit E | NADH-quinone oxidoreductase subunit NuoE. Pfam: 2Fe-2S_thioredx (PF01257.26). | 2Fe-2S_thioredx |
Family assigned |
| nuoF Rv3150 |
mtbc0_003348 |
NADH-quinone oxidoreductase subunit F | NADH-quinone oxidoreductase subunit NuoF. Pfam: Complex1_51K (PF01512.23), SLBB (PF10531.16), NADH_4Fe-4S (PF10589.15). | Complex1_51K SLBB NADH_4Fe-4S |
Family assigned |
| nuoG Rv3151 |
mtbc0_003349 |
NADH-quinone oxidoreductase subunit G | NADH-quinone oxidoreductase subunit G. Pfam: Fer2_4 (PF13510.12), Fer2 (PF00111.33), NADH-G_4Fe-4S_3 (PF10588.15), Fer4_Nqo3 (PF22117.3), Molybdopterin (PF00384.28), Molydop_binding (PF01568.28). | Fer2_4 Fer2 NADH-G_4Fe-4S_3 Fer4_Nqo3 Molybdopterin Molydop_binding |
Family assigned |
| nuoH Rv3152 |
mtbc0_003350 |
NADH-quinone oxidoreductase subunit H | NADH-quinone oxidoreductase subunit NuoH. Pfam: NADHdh (PF00146.27). | NADHdh |
Family assigned |
| nuoI Rv3153 |
mtbc0_003351 |
NADH-quinone oxidoreductase subunit I | NADH-quinone oxidoreductase subunit NuoI. Pfam: Fer4_10 (PF13237.12), Fer4_7 (PF12838.13), Fer4_9 (PF13187.12), Fer4 (PF00037.33), Fer4_6 (PF12837.13), Fer4_2 (PF12797.13), Fer4_4 (PF12800.13), Fer4_3 (PF12798.13). | Fer4_10 Fer4_7 Fer4_9 Fer4 Fer4_6 Fer4_2 Fer4_4 Fer4_3 |
Family assigned |
| nuoJ Rv3154 |
mtbc0_003352 |
NADH-quinone oxidoreductase subunit J | NADH-quinone oxidoreductase subunit J. Pfam: Oxidored_q3 (PF00499.26). | Oxidored_q3 |
Family assigned |
| nuoK Rv3155 |
mtbc0_003353 |
NADH-quinone oxidoreductase subunit K | NADH-quinone oxidoreductase subunit NuoK. Pfam: Oxidored_q2 (PF00420.30). | Oxidored_q2 |
Family assigned |
| nuoL Rv3156 |
mtbc0_003354 |
NADH-quinone oxidoreductase subunit L | NADH-quinone oxidoreductase subunit L. Pfam: Proton_antipo_N (PF00662.27), Proton_antipo_M (PF00361.26). | Proton_antipo_N Proton_antipo_M |
Family assigned |
| nuoM Rv3157 |
mtbc0_003355 |
NADH-quinone oxidoreductase subunit M | NADH-quinone oxidoreductase subunit M. Pfam: Proton_antipo_M (PF00361.26). | Proton_antipo_M |
Family assigned |
| nuoN Rv3158 |
mtbc0_003356 |
NADH-quinone oxidoreductase subunit N | NADH-quinone oxidoreductase subunit NuoN. Pfam: Proton_antipo_M (PF00361.26). | Proton_antipo_M |
Family assigned |
| PPE53 Rv3159c |
- |
PPE family protein PPE53 | PPE family protein PPE53. Pfam: PPE (PF00823.26), Pentapeptide_2 (PF01469.25). | PPE Pentapeptide_2 |
Family assigned |