Genes
3906 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| Rv1303 Rv1303 |
mtbc0_001395 |
hypothetical protein | ATP synthase subunit I. Pfam: ATP-synt_I (PF03899.22). | ATP-synt_I |
Family assigned |
| atpB Rv1304 |
mtbc0_001396 |
ATP synthase subunit A | F0F1 ATP synthase subunit A. Pfam: ATP-synt_A (PF00119.26). | ATP-synt_A |
Family assigned |
| atpE Rv1305 |
mtbc0_001397 |
ATP synthase subunit C | F0F1 ATP synthase subunit C. Pfam: ATP-synt_C (PF00137.27). | ATP-synt_C |
Family assigned |
| atpF Rv1306 |
mtbc0_001398 |
ATP synthase subunit B | F0F1 ATP synthase subunit B. Pfam: ATP-synt_B (PF00430.24). | ATP-synt_B |
Family assigned |
| atpH Rv1307 |
mtbc0_001399 |
ATP synthase subunit b/delta | F0F1 ATP synthase subunit B/delta. Pfam: ATP-synt_B (PF00430.24), OSCP (PF00213.24). | ATP-synt_B OSCP |
Family assigned |
| atpA Rv1308 |
mtbc0_001400 |
ATP synthase subunit alpha | F0F1 ATP synthase subunit alpha. Pfam: ATP-synt_ab_N (PF02874.30), ATP-synt_ab (PF00006.32), ATP-synt_ab_C (PF00306.33). | ATP-synt_ab_N ATP-synt_ab ATP-synt_ab_C |
Family assigned |
| atpG Rv1309 |
mtbc0_001401 |
ATP synthase subunit gamma | F0F1 ATP synthase subunit gamma. Pfam: ATP-synt (PF00231.25). | ATP-synt |
Family assigned |
| atpD Rv1310 |
mtbc0_001402 |
ATP synthase subunit beta | F0F1 ATP synthase subunit beta. Pfam: ATP-synt_ab_N (PF02874.30), ATP-synt_ab (PF00006.32), ATP-synt_VA_C (PF22919.2). | ATP-synt_ab_N ATP-synt_ab ATP-synt_VA_C |
Family assigned |
| atpC Rv1311 |
mtbc0_001403 |
ATP synthase subunit epsilon | F0F1 ATP synthase subunit epsilon. Pfam: ATP-synt_DE_N (PF02823.22). | ATP-synt_DE_N |
Family assigned |
| Rv1312 Rv1312 |
mtbc0_001404 |
hypothetical protein | DUF2550; Foldseek best hit (PH domain, TM 0.46) not conclusive. Function unknown. | DUF2550 |
Still unknown |
| Rv1313c Rv1313c |
mtbc0_000786 |
insertion sequence element IS1557 transposase | ISL3-like element IS1557 family transposase. Pfam: Zn_ribbon_ISL3 (PF14690.12), HTH_Tnp_ISL3 (PF13542.13), DDE_Tnp_ISL3 (PF01610.24). | Zn_ribbon_ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 |
Family assigned |
| Rv1314c Rv1314c |
mtbc0_001406 |
cob(I)yrinic acid a,c-diamide adenosyltransferase | Cob(I)yrinic acid a%2Cc-diamide adenosyltransferase. Pfam: Cob_adeno_trans (PF01923.24). | Cob_adeno_trans |
Resolved |
| murA Rv1315 |
mtbc0_001407 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase | UDP-N-acetylglucosamine 1-carboxyvinyltransferase. Pfam: EPSP_synthase (PF00275.26). | EPSP_synthase |
Resolved |
| ogt Rv1316c |
mtbc0_001411 |
methylated-DNA--protein-cysteine methyltransferase | Methylated-DNA--protein-cysteine methyltransferase. Pfam: Methyltransf_1N (PF02870.22), DNA_binding_1 (PF01035.27). | Methyltransf_1N DNA_binding_1 |
Resolved |
| alkA Rv1317c |
mtbc0_001412 |
bifunctional regulatory protein/DNA repair enzyme AlkA | Bifunctional regulatory protein/DNA repair enzyme AlkA. Pfam: Ada_Zn_binding (PF02805.22), HTH_18 (PF12833.14), AlkA_N (PF06029.18), HhH-GPD (PF00730.32). | Ada_Zn_binding HTH_18 AlkA_N HhH-GPD |
Family assigned |
| Rv1318c Rv1318c |
mtbc0_001413 |
adenylate cyclase | Adenylate/guanylate cyclase domain-containing protein. Pfam: HAMP (PF00672.31), Guanylate_cyc (PF00211.26). | HAMP Guanylate_cyc |
Family assigned |
| Rv1319c Rv1319c |
- |
adenylate cyclase | Adenylate cyclase. Pfam: HAMP (PF00672.31), Guanylate_cyc (PF00211.26). | HAMP Guanylate_cyc |
Resolved |
| Rv1320c Rv1320c |
mtbc0_001416 |
adenylate cyclase | Adenylate/guanylate cyclase domain-containing protein. Pfam: HAMP (PF00672.31), Guanylate_cyc (PF00211.26). | HAMP Guanylate_cyc |
Family assigned |
| Rv1321 Rv1321 |
- |
endonuclease NucS | Endonuclease NucS. Pfam: NucS_N (PF21003.3), NucS_C (PF01939.22). | NucS_N NucS_C |
Resolved |
| Rv1322 Rv1322 |
mtbc0_001418 |
hypothetical protein | Contains Rv1322 (PF27609.1) domain(s); putative function inferred from the domain architecture. | Rv1322 |
Family assigned |
| Rv1322A Rv1322A |
- |
hypothetical protein | Contains Glyoxalase (PF00903.32), Glyoxalase_3 (PF13468.13), Glyoxalase_4 (PF13669.13) domain(s); putative function inferred from the domain architecture. | Glyoxalase Glyoxalase_3 Glyoxalase_4 |
Family assigned |
| fadA4 Rv1323 |
- |
acetyl-CoA acetyltransferase | Acetyl-CoA acetyltransferase. Pfam: Thiolase_N (PF00108.30), ketoacyl-synt (PF00109.33), Thiolase_C (PF02803.25). | Thiolase_N ketoacyl-synt Thiolase_C |
Resolved |
| Rv1324 Rv1324 |
mtbc0_001421 |
thioredoxin | Co-chaperone YbbN. Pfam: Thioredoxin (PF00085.27), TPR_20 (PF14561.13). | Thioredoxin TPR_20 |
Resolved |
| PE_PGRS24 Rv1325c |
- |
PE-PGRS family protein PE_PGRS24 | PE-PGRS family protein PE_PGRS24. Pfam: PE (PF00934.26), PGRS (PF21526.3). | PE PGRS |
Family assigned |
| glgB Rv1326c |
mtbc0_001423 |
1,4-alpha-glucan branching protein | 1%2C4-alpha-glucan branching protein GlgB. Pfam: GlgB_N (PF22019.3), CBM_48 (PF02922.25), Alpha-amylase (PF00128.32), Alpha-amylase_C (PF02806.25). | GlgB_N CBM_48 Alpha-amylase Alpha-amylase_C |
Resolved |
| glgE Rv1327c |
- |
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase. Pfam: GlgE_dom_N_S (PF11896.15), GLGE_C (PF21702.4). | GlgE_dom_N_S GLGE_C |
Resolved |
| glgP Rv1328 |
mtbc0_001425 |
glycogen phosphorylase | Glycosyltransferase family 1 protein. Pfam: DUF3417 (PF11897.14), Phosphorylase (PF00343.27), GlgP_C (PF28476.1). | DUF3417 Phosphorylase GlgP_C |
Family assigned |
| dinG Rv1329c |
mtbc0_001426 |
ATP-dependent helicase DinG | ATP-dependent helicase DinG. Pfam: DEAD (PF00270.36), Helicase_C_2 (PF13307.13). | DEAD Helicase_C_2 |
Resolved |
| pncB1 Rv1330c |
mtbc0_001427 |
nicotinic acid phosphoribosyltransferase PncB1 | Nicotinate phosphoribosyltransferase. Pfam: NAPRTase_N (PF17767.8), QRPTase_C (PF01729.26), NAPRTase (PF04095.23). | NAPRTase_N QRPTase_C NAPRTase |
Resolved |
| clpS Rv1331 |
mtbc0_001428 |
ATP-dependent Clp protease adapter protein ClpS | ATP-dependent Clp protease adapter ClpS. Pfam: ClpS (PF02617.23). | ClpS |
Resolved |
| Rv1332 Rv1332 |
- |
transcriptional regulator | Transcriptional regulator. | DUF2017 |
Family assigned |
| Rv1333 Rv1333 |
mtbc0_001430 |
hydrolase | P1 family peptidase. Pfam: Peptidase_S58 (PF03576.20). | Peptidase_S58 |
Family assigned |
| mec Rv1334 |
mtbc0_001431 |
[CysO | CysO-cysteine peptidase. Pfam: Prok-JAB (PF14464.12). | Prok-JAB |
Resolved |
| cysO Rv1335 |
mtbc0_001432 |
sulfur carrier protein CysO | Sulfur carrier protein CysO. Pfam: ThiS (PF02597.27). | ThiS |
Resolved |
| cysM Rv1336 |
mtbc0_001433 |
O-phosphoserine sulfhydrylase | O-phosphoserine sulfhydrylase. Pfam: PALP (PF00291.32). | PALP |
Resolved |
| Rv1337 Rv1337 |
mtbc0_001434 |
integral membrane protein | Rhomboid family intramembrane serine protease. Pfam: Rhomboid (PF01694.29). | Rhomboid |
Family assigned |
| murI Rv1338 |
mtbc0_001435 |
glutamate racemase | Glutamate racemase. Pfam: Asp_Glu_race (PF01177.28). | Asp_Glu_race |
Resolved |
| Rv1339 Rv1339 |
- |
hypothetical protein | Contains Anti-Pycsar_Apyc1 (PF23023.2), Lactamase_B (PF00753.34), Lactamase_B_2 (PF12706.14) domain(s); putative function inferred from the domain architecture. | Anti-Pycsar_Apyc1 Lactamase_B Lactamase_B_2 |
Family assigned |
| rphA Rv1340 |
mtbc0_001437 |
ribonuclease PH | Ribonuclease PH. Pfam: RNase_PH (PF01138.28), RNase_PH_C (PF03725.21). | RNase_PH RNase_PH_C |
Resolved |
| rdgB Rv1341 |
mtbc0_001438 |
non-canonical purine NTP pyrophosphatase | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase. Pfam: Ham1p_like (PF01725.22). | Ham1p_like |
Family assigned |
| Rv1342c Rv1342c |
- |
hypothetical protein | Polytopic integral membrane protein with 3 predicted transmembrane helices (DeepTMHMM). RefSeq leaves it 'hypothetical protein'. A topological feature consistent with a membrane transporter/permease or membrane-embedded enzyme; the transported substrate and molecular function are undetermined. | DUF3817 |
Family assigned |
| lprD Rv1343c |
mtbc0_001440 |
lipoprotein LprD | GutM/SrlR-like operon-regulator-family protein (eggNOG COG1566, COG category V). RefSeq leaves it 'hypothetical protein'. Regulatory role suggested by orthology; target operon undetermined. | Family assigned | |
| mbtL Rv1344 |
- |
acyl carrier protein MbtL | Acyl carrier protein MbtL. Pfam: PP-binding (PF00550.32). | PP-binding |
Resolved |
| mbtM Rv1345 |
mtbc0_001442 |
long-chain-fatty-acid--ACP ligase MbtM | Long-chain-fatty acid--ACP ligase MbtM. Pfam: AMP-binding (PF00501.35). | AMP-binding |
Resolved |
| mbtN Rv1346 |
mtbc0_001443 |
acyl-[acyl-carrier-protein | Acyl-ACP dehydrogenase MbtN. Pfam: Acyl-CoA_dh_M (PF02770.25), Acyl-CoA_dh_1 (PF00441.30). | Acyl-CoA_dh_M Acyl-CoA_dh_1 |
Resolved |
| mbtK Rv1347c |
mtbc0_001444 |
lysine N-acetyltransferase MbtK | Lysine N-acyltransferase MbtK. Pfam: Acetyltransf_8 (PF13523.13). | Acetyltransf_8 |
Resolved |
| irtA Rv1348 |
mtbc0_001446 |
iron ABC transporter ATP-binding protein/permease IrtA | Iron ABC transporter ATP-binding protein/permease IrtA. Pfam: FAD_binding_9 (PF08021.18), SIP (PF04954.19), ABC_membrane (PF00664.29), ABC_tran (PF00005.34). | FAD_binding_9 SIP ABC_membrane ABC_tran |
Family assigned |
| irtB Rv1349 |
mtbc0_001447 |
iron ABC transporter ATP-binding protein/permease IrtB | Iron ABC transporter ATP-binding protein/permease IrtB. Pfam: ABC_tran (PF00005.34). | ABC_tran |
Family assigned |
| fabG2 Rv1350 |
mtbc0_001449 |
3-oxoacyl-ACP reductase FabG | 3-oxoacyl-ACP reductase FabG. Pfam: adh_short (PF00106.32), KR (PF08659.17), adh_short_C2 (PF13561.13). | adh_short KR adh_short_C2 |
Resolved |
| Rv1351 Rv1351 |
- |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown |