Genes
3906 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| Rv3360 Rv3360 |
mtbc0_003575 |
hypothetical protein | FHA domain-containing protein. Pfam: FHA (PF00498.32). | FHA |
Family assigned |
| mfpA Rv3361c |
mtbc0_003576 |
hypothetical protein | Pentapeptide repeat protein MfpA. Pfam: Pentapeptide_3 (PF13576.13), Pentapeptide (PF00805.29). | Pentapeptide_3 Pentapeptide |
Resolved |
| Rv3362c Rv3362c |
mtbc0_003577 |
ATP/GTP-binding protein | ATP/GTP-binding protein. Pfam: ATP_bind_1 (PF03029.24). | ATP_bind_1 |
Family assigned |
| Rv3363c Rv3363c |
mtbc0_003578 |
hypothetical protein | MarR-family DNA-binding transcriptional regulator (eggNOG COG1846, transcription COG category K). A winged-HTH transcriptional regulator; regulon undetermined. | DUF742 |
Family assigned |
| Rv3364c Rv3364c |
mtbc0_003579 |
hypothetical protein | Serine protease inhibitor. Pfam: Robl_LC7 (PF03259.24). | Robl_LC7 |
Resolved |
| Rv3365c Rv3365c |
mtbc0_003580 |
hypothetical protein | Sensor histidine kinase. Pfam: DUF8316 (PF26990.1), HATPase_c (PF02518.32). | DUF8316 HATPase_c |
Resolved |
| spoU Rv3366 |
mtbc0_003581 |
tRNA/rRNA methylase SpoU | TRNA (cytidine(34)-2'-O)-methyltransferase. Pfam: SpoU_methylase (PF00588.25). | SpoU_methylase |
Resolved |
| PE_PGRS51 Rv3367 |
- |
PE-PGRS family protein PE_PGRS51 | PE-PGRS family protein PE_PGRS51. Pfam: PE (PF00934.26), PGRS (PF21526.3). | PE PGRS |
Family assigned |
| Rv3368c Rv3368c |
mtbc0_003583 |
oxidoreductase | Nitroreductase family protein. Pfam: Nitroreductase (PF00881.30). | Nitroreductase |
Family assigned |
| Rv3369 Rv3369 |
- |
hypothetical protein | Contains PNPOx_N (PF01243.28) domain(s); putative function inferred from the domain architecture. | PNPOx_N |
Family assigned |
| dnaE2 Rv3370c |
- |
error-prone DNA polymerase | Error-prone DNA polymerase. Pfam: PHP (PF02811.27), DNA_pol3_alpha (PF07733.19), DNA_pol3_finger (PF17657.7), HHH_6 (PF14579.13), tRNA_anti-codon (PF01336.32). | PHP DNA_pol3_alpha DNA_pol3_finger HHH_6 tRNA_anti-codon |
Resolved |
| Rv3371 Rv3371 |
mtbc0_003586 |
diacyglycerol O-acyltransferase | Diacylglycerol O-acyltransferase. Pfam: WS_DGAT_cat (PF03007.22), WS_DGAT_C (PF06974.19). | WS_DGAT_cat WS_DGAT_C |
Resolved |
| otsB2 Rv3372 |
mtbc0_003587 |
trehalose 6-phosphate phosphatase | Trehalose-phosphatase. Pfam: Trehalose_PPase (PF02358.23). | Trehalose_PPase |
Resolved |
| echA18 Rv3373 |
- |
enoyl-CoA hydratase | Enoyl-CoA hydratase. Pfam: ECH_1 (PF00378.26), ECH_2 (PF16113.11). | ECH_1 ECH_2 |
Resolved |
| amiD Rv3375 |
mtbc0_003590 |
amidase | Amidase. Pfam: Amidase (PF01425.27). | Amidase |
Resolved |
| Rv3376 Rv3376 |
mtbc0_003591 |
phosphatase | HAD family phosphatase. Pfam: Hydrolase (PF00702.33), HAD_2 (PF13419.13), Hydrolase_like (PF13242.13). | Hydrolase HAD_2 Hydrolase_like |
Family assigned |
| Rv3377c Rv3377c |
mtbc0_003592 |
type B diterpene cyclase | Type B diterpene cyclase. Pfam: SQHop_cyclase_C (PF13243.13). | SQHop_cyclase_C |
Resolved |
| Rv3378c Rv3378c |
mtbc0_003593 |
diterpene synthase | Diterpene synthase. | Resolved | |
| dxs2 Rv3379c |
- |
1-deoxy-D-xylulose-5-phosphate synthase | 1-deoxy-D-xylulose-5-phosphate synthase. Pfam: DXP_synthase_N (PF13292.12), Transket_pyr (PF02779.30), Transketolase_C (PF02780.26). | DXP_synthase_N Transket_pyr Transketolase_C |
Resolved |
| Rv3382c Rv3382c |
- |
4-hydroxy-3-methylbut-2-enyl diphosphate reductase | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. Pfam: LYTB (PF02401.24). | LYTB |
Resolved |
| idsB Rv3383c |
mtbc0_003596 |
polyprenyl synthetase IdsB | Polyprenyl synthetase family protein. Pfam: polyprenyl_synt (PF00348.23). | polyprenyl_synt |
Family assigned |
| vapC46 Rv3384c |
mtbc0_003597 |
ribonuclease VapC46 | Type II toxin-antitoxin system VapC family toxin. Pfam: PIN (PF01850.28). | PIN |
Family assigned |
| vapB46 Rv3385c |
- |
antitoxin VapB46 | Antitoxin VapB46. Pfam: PhdYeFM_antitox (PF02604.27). | PhdYeFM_antitox |
Resolved |
| Rv3386 Rv3386 |
- |
transposase | Transposase. | DUF772 |
Resolved |
| Rv3387 Rv3387 |
- |
transposase | Transposase. Pfam: DDE_Tnp_1 (PF01609.28). | DDE_Tnp_1 |
Resolved |
| PE_PGRS52 Rv3388 |
- |
PE-PGRS family protein PE_PGRS52 | PE-PGRS family protein PE_PGRS52. Pfam: PE (PF00934.26), PGRS (PF21526.3). | PE PGRS |
Family assigned |
| htdY Rv3389c |
mtbc0_003601 |
3-hydroxyacyl-thioester dehydratase HtdY | 3-hydroxyacyl-thioester dehydratase HtdY. Pfam: MFE-2_hydrat-2_N (PF22622.3), MaoC_dehydratas (PF01575.26). | MFE-2_hydrat-2_N MaoC_dehydratas |
Resolved |
| lpqD Rv3390 |
mtbc0_003602 |
lipoprotein LpqD | Histidine phosphatase family protein. Pfam: His_Phos_1 (PF00300.28). | His_Phos_1 |
Family assigned |
| acrA1 Rv3391 |
mtbc0_003603 |
acyl-CoA-reductase AcrA | SDR family oxidoreductase. Pfam: Epimerase (PF01370.28), NAD_binding_4 (PF07993.19), GDP_Man_Dehyd (PF16363.12), NAD_binding_10 (PF13460.13), adh_short (PF00106.32), KR (PF08659.17), adh_short_C2 (PF13561.13). | Epimerase NAD_binding_4 GDP_Man_Dehyd NAD_binding_10 adh_short KR adh_short_C2 |
Family assigned |
| cmaA1 Rv3392c |
mtbc0_003604 |
cyclopropane mycolic acid synthase CmaA | Cyclopropane mycolic acid synthase CmaA1. Pfam: CMAS (PF02353.27), Methyltransf_23 (PF13489.13), Methyltransf_25 (PF13649.13), Methyltransf_12 (PF08242.19), Methyltransf_11 (PF08241.19). | CMAS Methyltransf_23 Methyltransf_25 Methyltransf_12 Methyltransf_11 |
Resolved |
| iunH Rv3393 |
mtbc0_003605 |
nucleoside hydrolase | Nucleoside hydrolase IunH. Pfam: IU_nuc_hydro (PF01156.25). | IU_nuc_hydro |
Resolved |
| Rv3394c Rv3394c |
mtbc0_003606 |
hypothetical protein | DNA polymerase Y family protein. Pfam: IMS (PF00817.26). | IMS |
Family assigned |
| Rv3395A Rv3395A |
- |
membrane protein | Membrane protein. | Family assigned | |
| Rv3395c Rv3395c |
mtbc0_003607 |
hypothetical protein | Contains MT3502_N (PF27531.1), Rv3395c_C (PF27314.1) domain(s); putative function inferred from the domain architecture. | MT3502_N Rv3395c_C |
Family assigned |
| guaA Rv3396c |
mtbc0_003609 |
GMP synthase | Glutamine-hydrolyzing GMP synthase. Pfam: GATase (PF00117.35), Peptidase_C26 (PF07722.20), NAD_synthase (PF02540.24), GMP_synt_C (PF00958.28). | GATase Peptidase_C26 NAD_synthase GMP_synt_C |
Resolved |
| phyA Rv3397c |
mtbc0_003610 |
phytoene synthase | Presqualene diphosphate synthase HpnD. Pfam: SQS_PSY (PF00494.25). | SQS_PSY |
Resolved |
| idsA1 Rv3398c |
- |
multifunctional dimethylallyltransferase/geranyltranstransferase/farnesyltranstransferase | Multifunctional dimethylallyltransferase/geranyltranstransferase/farnesyltranstransferase. Pfam: polyprenyl_synt (PF00348.23). | polyprenyl_synt |
Resolved |
| Rv3399 Rv3399 |
- |
S-adenosylmethionine-dependent methyltransferase | S-adenosylmethionine-dependent methyltransferase. Pfam: LCM (PF04072.21). | LCM |
Resolved |
| Rv3400 Rv3400 |
mtbc0_003613 |
hydrolase | Beta-phosphoglucomutase family hydrolase. Pfam: Hydrolase (PF00702.33), HAD_2 (PF13419.13). | Hydrolase HAD_2 |
Family assigned |
| Rv3401 Rv3401 |
mtbc0_003614 |
glycosyl hydrolase | Glycoside hydrolase family 65 protein. Pfam: Glyco_hydro_65N (PF03636.22), Glyco_hydro_65m (PF03632.22), Glyco_hydro_65C (PF03633.21). | Glyco_hydro_65N Glyco_hydro_65m Glyco_hydro_65C |
Family assigned |
| Rv3402c Rv3402c |
mtbc0_001626 |
hypothetical protein | DegT/DnrJ/EryC1/StrS family aminotransferase. Pfam: DegT_DnrJ_EryC1 (PF01041.24). | DegT_DnrJ_EryC1 |
Family assigned |
| Rv3403c Rv3403c |
mtbc0_003617 |
hypothetical protein | FAD/NAD(P)-binding protein. Pfam: NAD_binding_9 (PF13454.13). | NAD_binding_9 |
Family assigned |
| Rv3404c Rv3404c |
mtbc0_003618 |
hypothetical protein | DTDP-4-amino-4%2C6-dideoxyglucose formyltransferase. Pfam: Formyl_trans_N (PF00551.25), N_formyltrans_C (PF18216.7). | Formyl_trans_N N_formyltrans_C |
Resolved |
| Rv3405c Rv3405c |
mtbc0_003619 |
HTH-type transcriptional regulator | Helix-turn-helix domain-containing protein. Pfam: TetR_N (PF00440.30). | TetR_N |
Family assigned |
| Rv3406 Rv3406 |
mtbc0_003620 |
dioxygenase | Alpha-ketoglutarate-dependent sulfate ester dioxygenase. Pfam: TauD (PF02668.23). | TauD |
Resolved |
| vapB47 Rv3407 |
- |
antitoxin VapB47 | Antitoxin VapB47. Pfam: PhdYeFM_antitox (PF02604.27). | PhdYeFM_antitox |
Resolved |
| vapC47 Rv3408 |
mtbc0_003622 |
ribonuclease VapC47 | Type II toxin-antitoxin system VapC family toxin. Pfam: PIN (PF01850.28). | PIN |
Family assigned |
| choD Rv3409c |
mtbc0_003623 |
cholesterol oxidase | Cholesterol oxidase. Pfam: FAD_binding_2 (PF00890.31), NAD_binding_8 (PF13450.13), GMC_oxred_N (PF00732.26), GMC_oxred_C (PF05199.20). | FAD_binding_2 NAD_binding_8 GMC_oxred_N GMC_oxred_C |
Resolved |
| guaB3 Rv3410c |
mtbc0_003624 |
oxidoreductase | GuaB3 family IMP dehydrogenase-related protein. Pfam: IMPDH (PF00478.32), FMN_dh (PF01070.25). | IMPDH FMN_dh |
Family assigned |
| guaB2 Rv3411c |
mtbc0_003625 |
inosine-5'-monophosphate dehydrogenase | IMP dehydrogenase. Pfam: IMPDH (PF00478.32), CBS (PF00571.34). | IMPDH CBS |
Resolved |