MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 3 177 455–3 257 455 bp (80 000 bp)
+ strand − strand cobB (Rv2848c) — requalified: cobyrinate a%2Cc-diamide synthase Rv2850c (Rv2850c) — family_assigned: magnesium chelatase subunit D family protein Rv2851c (Rv2851c) — family_assigned: GNAT family N-acetyltransferase mqo (Rv2852c) — requalified: malate dehydrogenase (quinone) Rv2854 (Rv2854) — family_assigned: alpha/beta hydrolase nicT (Rv2856) — family_assigned: HoxN/HupN/NixA family nickel/cobalt transporter Rv2857c (Rv2857c) — requalified: 3-oxoacyl-ACP reductase Rv2859c (Rv2859c) — requalified: gamma-glutamyl-gamma-aminobutyrate hydrolase glnA4 (Rv2860c) — family_assigned: glutamine synthetase family protein Rv2862c (Rv2862c) — family_assigned: DUF1707 domain-containing protein vapC23 (Rv2863) — family_assigned: type II toxin-antitoxin system VapC family toxin Rv2864c (Rv2864c) — family_assigned: penicillin-binding protein relF (Rv2865) — requalified: type II toxin-antitoxin system antitoxin RelF relG (Rv2866) — family_assigned: type II toxin-antitoxin system RelE/ParE family toxin Rv2867c (Rv2867c) — family_assigned: GNAT family N-acetyltransferase gcpE (Rv2868c) — requalified: flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos rip (Rv2869c) — requalified: zinc metalloprotease Rip dxr (Rv2870c) — requalified: 1-deoxy-D-xylulose-5-phosphate reductoisomerase vapB43 (Rv2871) — family_assigned: ribbon-helix-helix domain-containing protein vapC43 (Rv2872) — family_assigned: type II toxin-antitoxin system VapC family toxin mpt83 (Rv2873) — requalified: cell surface glycolipoprotein Mpt83 mpt70 (Rv2875) — family_assigned: fasciclin domain-containing protein mpt53 (Rv2878c) — requalified: protein disulfide oxidoreductase cdsA (Rv2881c) — requalified: phosphatidate cytidylyltransferase frr (Rv2882c) — requalified: ribosome recycling factor pyrH (Rv2883c) — requalified: UMP kinase Rv2887 (Rv2887) — family_assigned: MarR family transcriptional regulator amiC (Rv2888c) — requalified: amidase tsf (Rv2889c) — requalified: translation elongation factor Ts rpsB (Rv2890c) — requalified: 30S ribosomal protein S2 Rv2893 (Rv2893) — requalified: LLM class F420-dependent oxidoreductase xerC (Rv2894c) — requalified: tyrosine recombinase XerC viuB (Rv2895c) — requalified: siderophore-interacting protein dprA (Rv2896c) — requalified: DNA-processing protein DprA Rv2897c (Rv2897c) — family_assigned: YifB family Mg chelatase-like AAA ATPase Rv2898c (Rv2898c) — family_assigned: YraN family protein fdhD (Rv2899c) — requalified: formate dehydrogenase accessory sulfurtransferase FdhD fdhF (Rv2900c) — family_assigned: FdhF/YdeP family oxidoreductase fdhF Rv2901c (Rv2901c) — dark: DUF2469 domain-containing protein rnhB (Rv2902c) — requalified: ribonuclease HII lepB (Rv2903c) — requalified: signal peptidase I rplS (Rv2904c) — requalified: 50S ribosomal protein L19 lppW (Rv2905) — family_assigned: hypothetical protein trmD (Rv2906c) — requalified: tRNA (guanosine(37)-N1)-methyltransferase TrmD rimM (Rv2907c) — requalified: ribosome maturation factor RimM Rv2908c (Rv2908c) — family_assigned: RNA-binding protein rpsP (Rv2909c) — requalified: 30S ribosomal protein S16 Rv2912c (Rv2912c) — family_assigned: TetR/AcrR family transcriptional regulator Rv2913c (Rv2913c) — family_assigned: amidohydrolase family protein pknI (Rv2914c) — requalified: serine/threonine protein kinase PknI Rv2915c (Rv2915c) — family_assigned: amidohydrolase family protein ffh (Rv2916c) — requalified: signal recognition particle protein glnD (Rv2918c) — requalified: [protein-PII] uridylyltransferase glnD glnB (Rv2919c) — family_assigned: nitrogen regulatory protein P-II amt (Rv2920c) — requalified: ammonium transporter ftsY (Rv2921c) — requalified: signal recognition particle-docking protein FtsY smc (Rv2922c) — requalified: chromosome segregation protein SMC smc 3 186 kb 3 200 kb 3 213 kb 3 226 kb 3 240 kb 3 254 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.