MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 3 840 807–3 920 807 bp (80 000 bp)
+ strand − strand Rv3400 (Rv3400) — family_assigned: beta-phosphoglucomutase family hydrolase Rv3401 (Rv3401) — family_assigned: glycoside hydrolase family 65 protein Rv3401 Rv3402c (Rv3402c) — family_assigned: DegT/DnrJ/EryC1/StrS family aminotransferase Rv3403c (Rv3403c) — family_assigned: FAD/NAD(P)-binding protein Rv3404c (Rv3404c) — requalified: dTDP-4-amino-4%2C6-dideoxyglucose formyltransferase Rv3405c (Rv3405c) — family_assigned: helix-turn-helix domain-containing protein Rv3406 (Rv3406) — requalified: alpha-ketoglutarate-dependent sulfate ester dioxygenase vapC47 (Rv3408) — family_assigned: type II toxin-antitoxin system VapC family toxin choD (Rv3409c) — requalified: cholesterol oxidase guaB3 (Rv3410c) — family_assigned: GuaB3 family IMP dehydrogenase-related protein guaB2 (Rv3411c) — requalified: IMP dehydrogenase Rv3412 (Rv3412) — dark: DUF5319 domain-containing protein rsdA (Rv3413c) — requalified: anti-sigma D factor RsdA Rv3415c (Rv3415c) — family_assigned: hypothetical protein whiB3 (Rv3416) — family_assigned: redox-responsive transcriptional regulator WhiB3 groEL1 (Rv3417c) — requalified: chaperonin GroEL gcp (Rv3419c) — family_assigned: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex rimI (Rv3420c) — requalified: ribosomal protein S18-alanine N-acetyltransferase tsaB (Rv3421c) — family_assigned: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex tsaE (Rv3422c) — family_assigned: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex istB (Rv3427c) — family_assigned: IS21-like element ISMt2 family helper ATPase IstB Rv3424c (Rv3424c) — dark: hypothetical protein gadB (Rv3432c) — requalified: glutamate decarboxylase Rv3433c (Rv3433c) — requalified: NAD(P)H-hydrate dehydratase Rv3434c (Rv3434c) — family_assigned: rhomboid-like protein Rv3435c (Rv3435c) — family_assigned: DUF4436 domain-containing protein glmS (Rv3436c) — requalified: glutamine--fructose-6-phosphate transaminase (isomerizing) Rv3437 (Rv3437) — dark: DUF2510 domain-containing protein Rv3438 (Rv3438) — family_assigned: alpha/beta hydrolase Rv3439c (Rv3439c) — family_assigned: hypothetical protein Rv3440c (Rv3440c) — family_assigned: hypothetical protein mrsA (Rv3441c) — requalified: phosphoglucosamine mutase rpsI (Rv3442c) — requalified: 30S ribosomal protein S9 rplM (Rv3443c) — requalified: 50S ribosomal protein L13 esxT (Rv3444c) — family_assigned: WXG100 family type VII secretion target esxU (Rv3445c) — requalified: type VII secretion system ESX-4 protein EsxU Rv3446c (Rv3446c) — family_assigned: type VII secretion-associated protein eccC4 (Rv3447c) — family_assigned: type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase E eccC4 eccD4 (Rv3448) — family_assigned: type VII secretion system ESX-4 subunit EccD4 mycP4 (Rv3449) — requalified: type VII secretion system ESX-4 serine protease mycosin MycP eccB4 (Rv3450c) — family_assigned: type VII secretion system ESX-4 subunit EccB4 cut3 (Rv3451) — family_assigned: cutinase family protein cut4 (Rv3452) — requalified: cutinase Cut4 rplQ (Rv3456c) — requalified: 50S ribosomal protein L17 rpoA (Rv3457c) — family_assigned: DNA-directed RNA polymerase subunit alpha rpsD (Rv3458c) — requalified: 30S ribosomal protein S4 rpsK (Rv3459c) — requalified: 30S ribosomal protein S11 rpsM (Rv3460c) — requalified: 30S ribosomal protein S13 rpmJ (Rv3461c) — requalified: 50S ribosomal protein L36 Rv3463 (Rv3463) — requalified: LLM class F420-dependent oxidoreductase rmlB (Rv3464) — requalified: dTDP-glucose 4%2C6-dehydratase rmlC (Rv3465) — requalified: dTDP-4-dehydrorhamnose 3%2C5-epimerase mhpE (Rv3469c) — requalified: 4-hydroxy-2-oxovalerate aldolase ilvB2 (Rv3470c) — family_assigned: thiamine pyrophosphate-binding protein Rv3472 (Rv3472) — family_assigned: nuclear transport factor 2 family protein 3 848 kb 3 861 kb 3 874 kb 3 888 kb 3 902 kb 3 915 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.