MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 1 369 420–1 409 420 bp (40 000 bp)
+ strand − strand Rv1217c (Rv1217c) — family_assigned: multidrug efflux ABC transporter permease Rv1218c (Rv1218c) — family_assigned: multidrug efflux ABC transporter ATP-binding protein raaS (Rv1219c) — family_assigned: transcriptional regulator RaaS sigE (Rv1221) — requalified: RNA polymerase sigma factor SigE rseA (Rv1222) — requalified: anti-sigma E factor RseA tatB (Rv1224) — requalified: Sec-independent protein translocase protein TatB Rv1225c (Rv1225c) — family_assigned: HAD-IIA family hydrolase Rv1226c (Rv1226c) — family_assigned: PH domain-containing protein Rv1226c Rv1227c (Rv1227c) — family_assigned: PH domain-containing protein lpqX (Rv1228) — dark: hypothetical protein mrp (Rv1229c) — family_assigned: Mrp/NBP35 family ATP-binding protein mrp Rv1230c (Rv1230c) — family_assigned: lytic transglycosylase domain-containing protein Rv1230c Rv1231c (Rv1231c) — family_assigned: DUF1003 domain-containing protein Rv1232c (Rv1232c) — requalified: magnesium transporter Rv1232c Rv1233c (Rv1233c) — family_assigned: DUF4190 domain-containing protein Rv1234 (Rv1234) — requalified: general stress protein lpqY (Rv1235) — family_assigned: trehalose ABC transporter substrate-binding protein LpqY lpqY sugA (Rv1236) — family_assigned: trehalose ABC transporter permease SugA sugB (Rv1237) — family_assigned: trehalose ABC transporter permease SugB sugC (Rv1238) — family_assigned: trehalose ABC transporter ATP-binding protein SugC sugC corA (Rv1239c) — requalified: magnesium/cobalt transporter CorA corA mdh (Rv1240) — requalified: malate dehydrogenase vapB33 (Rv1241) — requalified: type II toxin-antitoxin system antitoxin VapB33 vapC33 (Rv1242) — family_assigned: type II toxin-antitoxin system VapC family toxin lpqZ (Rv1244) — family_assigned: glycine betaine ABC transporter substrate-binding protein Rv1245c (Rv1245c) — family_assigned: SDR family NAD(P)-dependent oxidoreductase relE (Rv1246c) — requalified: type II toxin-antitoxin system mRNA interferase RelE relB (Rv1247c) — family_assigned: type II toxin-antitoxin system Phd/YefM family antitoxin Rv1248c (Rv1248c) — family_assigned: multifunctional oxoglutarate decarboxylase/oxoglutarate dehy Rv1248c Rv1249c (Rv1249c) — family_assigned: hypothetical protein Rv1250 (Rv1250) — requalified: MFS transporter Rv1250 Rv1251c (Rv1251c) — family_assigned: TM0106 family RecB-like putative nuclease Rv1251c lprE (Rv1252c) — family_assigned: LppP/LprE family lipoprotein deaD (Rv1253) — requalified: DEAD/DEAH box helicase 1 372 kb 1 378 kb 1 384 kb 1 391 kb 1 398 kb 1 404 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.