MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 1 113 538–1 193 538 bp (80 000 bp)
+ strand − strand Rv0988 (Rv0988) — family_assigned: lipocalin-like domain-containing protein grcC2 (Rv0989c) — requalified: polyprenyl-diphosphate synthase GrcC Rv0990c (Rv0990c) — family_assigned: SAF domain-containing protein Rv0991c (Rv0991c) — family_assigned: FmdB family zinc ribbon protein Rv0992c (Rv0992c) — requalified: 5-formyltetrahydrofolate cyclo-ligase galU (Rv0993) — requalified: UTP--glucose-1-phosphate uridylyltransferase Rv0996 (Rv0996) — family_assigned: hypothetical protein Rv0998 (Rv0998) — family_assigned: GNAT family N-acetyltransferase arcA (Rv1001) — requalified: arginine deiminase Rv1002c (Rv1002c) — requalified: dolichyl-phosphate-mannose--protein mannosyltransferase rsmI (Rv1003) — requalified: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Rv1004c (Rv1004c) — family_assigned: hypothetical protein Rv1006 (Rv1006) — family_assigned: hypothetical protein metS (Rv1007c) — requalified: methionine--tRNA ligase ksgA (Rv1010) — requalified: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltra Rv1012 (Rv1012) — dark: hypothetical protein pks16 (Rv1013) — requalified: fatty acyl-AMP ligase pth (Rv1014c) — requalified: aminoacyl-tRNA hydrolase rplY (Rv1015c) — requalified: 50S ribosomal protein L25/general stress protein Ctc prsA (Rv1017c) — requalified: ribose-phosphate diphosphokinase glmU (Rv1018c) — requalified: bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosa Rv1019 (Rv1019) — family_assigned: TetR/AcrR family transcriptional regulator mfd (Rv1020) — requalified: transcription-repair coupling factor mfd Rv1021 (Rv1021) — requalified: nucleoside triphosphate pyrophosphohydrolase lpqU (Rv1022) — requalified: lytic murein transglycosylase eno (Rv1023) — requalified: phosphopyruvate hydratase Rv1024 (Rv1024) — family_assigned: septum formation initiator family protein ppx2 (Rv1026) — requalified: exopolyphosphatase Ppx2 kdpE (Rv1027c) — requalified: two-component system response regulator KdpE kdpD (Rv1028c) — requalified: sensor histidine kinase KdpD kdpD kdpA (Rv1029) — family_assigned: potassium-transporting ATPase subunit KdpA kdpB (Rv1030) — family_assigned: potassium-transporting ATPase subunit KdpB kdpB kdpC (Rv1031) — family_assigned: K(+)-transporting ATPase subunit C trcS (Rv1032c) — family_assigned: HAMP domain-containing sensor histidine kinase trcR (Rv1033c) — requalified: two-component system response regulator TrcR Rv1043c (Rv1043c) — requalified: serine protease Rv1044 (Rv1044) — family_assigned: type IV toxin-antitoxin system AbiEi family antitoxin domain Rv1045 (Rv1045) — family_assigned: nucleotidyl transferase AbiEii/AbiGii toxin family protein Rv1048c (Rv1048c) — dark: hypothetical protein Rv1049 (Rv1049) — requalified: oxidation-sensing regulator MosR Rv1050 (Rv1050) — family_assigned: SDR family oxidoreductase Rv1056 (Rv1056) — family_assigned: DUF427 domain-containing protein Rv1057 (Rv1057) — family_assigned: YncE family protein fadD14 (Rv1058) — requalified: long-chain fatty acid--CoA ligase Rv1059 (Rv1059) — requalified: dihydrodipicolinate reductase Rv1060 (Rv1060) — family_assigned: SRPBCC family protein Rv1061 (Rv1061) — requalified: class II glutamine amidotransferase Rv1062 (Rv1062) — family_assigned: patatin-like phospholipase family protein Rv1063c (Rv1063c) — family_assigned: patatin family protein 1 120 kb 1 134 kb 1 148 kb 1 161 kb 1 174 kb 1 188 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.