Genes
3974 genes matched.
| Gene | MTBC0 | Legacy (H37Rv) | MTBC0 PGAP / revised | Pfam | Verdict |
|---|---|---|---|---|---|
| Rv3851 Rv3851 |
mtbc0_004084 |
membrane protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| hns Rv3852 |
mtbc0_004085 |
histone-like protein Hns | Histone-like protein Hns. | Family assigned | |
| rraA Rv3853 |
mtbc0_004086 |
RNase E regulator RraA | Ribonuclease E activity regulator RraA. Pfam: RraA-like (PF03737.22). | RraA-like |
Resolved |
| ethA Rv3854c |
mtbc0_004087 |
monooxygenase EthA | FAD-containing monooxygenase EthA. Pfam: Pyr_redox_2 (PF07992.21), Pyr_redox_3 (PF13738.13), NAD_binding_8 (PF13450.13), FMO-like (PF00743.26). | Pyr_redox_2 Pyr_redox_3 NAD_binding_8 FMO-like |
Resolved |
| ethR Rv3855 |
mtbc0_004088 |
HTH-type transcriptional repressor EthR | HTH-type transcriptional regulator EthR. Pfam: TetR_N (PF00440.30), EthR_C (PF21313.3). | TetR_N EthR_C |
Family assigned |
| Rv3856c Rv3856c |
mtbc0_004089 |
hypothetical protein | PHP domain-containing protein. Pfam: HHH_8 (PF14716.14), PHP (PF02811.27). | HHH_8 PHP |
Family assigned |
| Rv3857c Rv3857c |
- |
membrane protein | Membrane protein. | Family assigned | |
| gltD Rv3858c |
mtbc0_004091 |
glutamate synthase small subunit | Glutamate synthase subunit beta. Pfam: Fer4_20 (PF14691.12), Pyr_redox_2 (PF07992.21), FAD_binding_3 (PF01494.26), Pyr_redox (PF00070.34), FAD_oxidored (PF12831.14), DAO (PF01266.31), FAD_binding_2 (PF00890.31), NAD_binding_8 (PF13450.13), Amino_oxidase (PF01593.31). | Fer4_20 Pyr_redox_2 FAD_binding_3 Pyr_redox FAD_oxidored DAO FAD_binding_2 NAD_binding_8 Amino_oxidase |
Family assigned |
| gltB Rv3859c |
mtbc0_004092 |
glutamate synthase large subunit | Glutamate synthase large subunit. Pfam: GATase_2 (PF00310.27), Glu_syn_central (PF04898.21), Glu_synthase (PF01645.24), GXGXG (PF01493.26). | GATase_2 Glu_syn_central Glu_synthase GXGXG |
Family assigned |
| Rv3860 Rv3860 |
mtbc0_004093 |
hypothetical protein | ATPase. Pfam: CbiA (PF01656.30). | CbiA |
Resolved |
| Rv3861 Rv3861 |
mtbc0_004094 |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| whiB6 Rv3862c |
- |
transcriptional regulator WhiB6 | Transcriptional regulator WhiB6. Pfam: Whib (PF02467.22). | Whib |
Family assigned |
| Rv3863 Rv3863 |
- |
hypothetical protein | Contains MSMEG_6518_N (PF27182.1) domain(s); putative function inferred from the domain architecture. | MSMEG_6518_N |
Family assigned |
| espE Rv3864 |
mtbc0_004097 |
ESX-1 secretion-associated protein EspE | Type VII secretion system ESX-1 associated protein EspE. Pfam: EspA_EspE (PF18879.7). | EspA_EspE |
Resolved |
| espF Rv3865 |
mtbc0_004098 |
ESX-1 secretion-associated protein EspF | Type VII secretion system ESX-1 associated protein EspF. Pfam: T7SS_ESX_EspC (PF10824.15). | T7SS_ESX_EspC |
Resolved |
| espG1 Rv3866 |
mtbc0_004099 |
ESX-1 secretion-associated protein EspG | Type VII secretion system ESX-1 adaptor EspG1. Pfam: ESX-1_EspG (PF14011.12). | ESX-1_EspG |
Resolved |
| espH Rv3867 |
mtbc0_004100 |
ESX-1 secretion-associated protein EspH | Type VII secretion system ESX-1 associated protein EspH. | Resolved | |
| eccA1 Rv3868 |
mtbc0_004101 |
ESX-1 secretion system protein EccA1 | Type VII secretion system ESX-1 AAA family ATPase EccA1. Pfam: T7SS_EccA1_N (PF21545.4), Mg_chelatase (PF01078.28), AAA (PF00004.36), AAA_lid_6 (PF17866.9). | T7SS_EccA1_N Mg_chelatase AAA AAA_lid_6 |
Family assigned |
| eccB1 Rv3869 |
mtbc0_004102 |
ESX-1 secretion system protein EccB | Type VII secretion system ESX-1 subunit EccB1. Pfam: T7SS_ESX1_EccB (PF05108.19). | T7SS_ESX1_EccB |
Family assigned |
| eccCa1 Rv3870 |
mtbc0_004103 |
ESX-1 secretion system protein EccCa | Type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCa1. Pfam: FtsK_SpoIIIE (PF01580.25). | FtsK_SpoIIIE |
Family assigned |
| eccCb1 Rv3871 |
mtbc0_004104 |
ESX-1 secretion system protein EccCb | Type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCb1. Pfam: FtsK_SpoIIIE (PF01580.25). | FtsK_SpoIIIE |
Family assigned |
| PE35 Rv3872 |
- |
PE family protein PE35 | PE family protein PE35. Pfam: PE (PF00934.26). | PE |
Family assigned |
| PPE68 Rv3873 |
- |
PPE family protein PPE68 | PPE family protein PPE68. Pfam: PPE (PF00823.26). | PPE |
Family assigned |
| esxB Rv3874 |
mtbc0_004107 |
ESAT-6-like protein EsxB | Type VII secretion system ESX-1 WXG100 family target CFP-10. Pfam: T7SS_ESX_EspC (PF10824.15), WXG100 (PF06013.19). | T7SS_ESX_EspC WXG100 |
Family assigned |
| esxA Rv3875 |
- |
ESAT-6 protein EsxA | ESAT-6 protein EsxA. Pfam: WXG100 (PF06013.19). | WXG100 |
Resolved |
| espI Rv3876 |
mtbc0_004110 |
ESX-1 secretion-associated protein EspI | MinD/ParA family protein. Pfam: CbiA (PF01656.30), AAA_31 (PF13614.13), ArsA_ATPase (PF02374.22). | CbiA AAA_31 ArsA_ATPase |
Family assigned |
| eccD1 Rv3877 |
mtbc0_004111 |
ESX-1 secretion system protein EccD1 | Type VII secretion system ESX-1 subunit EccD1. Pfam: YukD (PF08817.17), EccD (PF19053.7). | YukD EccD |
Family assigned |
| espJ Rv3878 |
mtbc0_004112 |
ESX-1 secretion-associated protein EspJ | Type VII secretion system ESX-1 associated protein EspJ. | Resolved | |
| espK Rv3879c |
- |
ESX-1 secretion-associated protein EspK | ESX-1 secretion-associated protein EspK. Pfam: EspK_C (PF27215.1). | EspK_C |
Family assigned |
| espL Rv3880c |
mtbc0_004114 |
ESX-1 secretion-associated protein EspL | Type VII secretion system ESX-1 associated protein EspL. Pfam: YbaB_DNA_bd (PF02575.22). | YbaB_DNA_bd |
Resolved |
| espB Rv3881c |
mtbc0_004115 |
ESX-1 secretion-associated protein EspB | Type VII secretion system ESX-1 target EspB. Pfam: EspB_PE (PF18625.8), EspB_PPE (PF21856.3). | EspB_PE EspB_PPE |
Resolved |
| eccE1 Rv3882c |
mtbc0_004116 |
ESX-1 secretion system protein EccE1 | Type VII secretion system ESX-1 subunit EccE1. Pfam: EccE (PF11203.14). | EccE |
Family assigned |
| mycP1 Rv3883c |
mtbc0_004117 |
membrane-anchored mycosin | Type VII secretion system ESX-1 serine protease mycosin MycP1. Pfam: Peptidase_S8 (PF00082.28). | Peptidase_S8 |
Resolved |
| eccA2 Rv3884c |
mtbc0_004118 |
ESX-2 secretion system protein EccA | Type VII secretion system ESX-2 AAA family ATPase EccA2. Pfam: T7SS_EccA1_N (PF21545.4), AAA (PF00004.36), AAA_lid_6 (PF17866.9). | T7SS_EccA1_N AAA AAA_lid_6 |
Family assigned |
| eccE2 Rv3885c |
mtbc0_004119 |
ESX-2 secretion system protein EccE | Type VII secretion system ESX-2 subunit EccE2. Pfam: EccE (PF11203.14). | EccE |
Family assigned |
| mycP2 Rv3886c |
mtbc0_004120 |
membrane-anchored mycosin | Type VII secretion system ESX-2 serine protease mycosin MycP2. Pfam: Peptidase_S8 (PF00082.28). | Peptidase_S8 |
Resolved |
| eccD2 Rv3887c |
mtbc0_004121 |
ESX-2 secretion system protein EccD | Type VII secretion system ESX-2 subunit EccD2. Pfam: YukD (PF08817.17), EccD (PF19053.7). | YukD EccD |
Family assigned |
| Rv3888c Rv3888c |
mtbc0_004122 |
membrane protein | MinD/ParA family protein. | Family assigned | |
| espG2 Rv3889c |
mtbc0_004123 |
ESX-2 secretion-associated protein EspG2 | Type VII secretion system ESX-2 associated protein EspG2. Pfam: ESX-1_EspG (PF14011.12). | ESX-1_EspG |
Resolved |
| esxC Rv3890c |
mtbc0_004124 |
ESAT-6 like protein EsxC | WXG100 family type VII secretion target. Pfam: WXG100 (PF06013.19). | WXG100 |
Family assigned |
| esxD Rv3891c |
mtbc0_004125 |
ESAT-6 like protein EsxD | WXG100 family type VII secretion target. Pfam: WXG100 (PF06013.19). | WXG100 |
Family assigned |
| PPE69 Rv3892c |
- |
PPE family protein PPE69 | PPE family protein PPE69. Pfam: PPE (PF00823.26). | PPE |
Family assigned |
| PE36 Rv3893c |
- |
PE family protein PE36 | PE family protein PE36. Pfam: PE (PF00934.26). | PE |
Family assigned |
| eccC2 Rv3894c |
mtbc0_004128 |
ESX-2 type VII secretion system protein EccC | Type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2. Pfam: FtsK_SpoIIIE (PF01580.25). | FtsK_SpoIIIE |
Family assigned |
| eccB2 Rv3895c |
mtbc0_004129 |
ESX-2 secretion system protein EccB | Type VII secretion system ESX-2 subunit EccB2. Pfam: T7SS_ESX1_EccB (PF05108.19). | T7SS_ESX1_EccB |
Family assigned |
| Rv3896c Rv3896c |
mtbc0_004130 |
hypothetical protein | Transglycosylase. | Resolved | |
| Rv3897c Rv3897c |
- |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. | Still unknown | |
| Rv3898c Rv3898c |
mtbc0_004131 |
hypothetical protein | Conserved hypothetical protein; no recognised domain. Function unknown. Foldseek best (non-significant) hit: 5sva-assembly1_T Mediator-RNA Polymerase II Pre-Initiation Complex (prob 0.38, TM 0.59). | Still unknown | |
| Rv3899c Rv3899c |
- |
hypothetical protein | Secreted protein (found in culture filtrate), conserved across mycobacteria, with an X-ray crystal structure of fragment 184-410 that defines a new protein family (an alpha/beta/alpha sandwich + alpha-helix bundle; no structures for homologues previously known). Immunoglobulin-like, candidate vaccine antigen. Molecular function unknown. (UniProt auto-name 'Tat' is a database artefact and is not adopted.) | DUF5632 DUF5631 |
Family assigned |
| Rv3900c Rv3900c |
mtbc0_004133 |
hypothetical protein | ESAT-6-like (WXG100) / ESX-PE-PPE superfamily protein associated with the Type VII (ESX) secretion system (four-helical-bundle, WXG motif) RefSeq leaves this locus uncharacterised. | Family assigned |