metV MTB000028
tRNA repeat-prone tRNA-Met (CAT)
This is an RNA, not a coding gene: it belongs to a separate track and carries none of the protein evidence layers.
Location
2581764–2581837 (- strand), 74 nt, on H37Rv
(NC_000962.3).
Intergenic (no overlapping coding sequence).
Upstream neighbour Rv2308a
(287 bp).
Downstream neighbour Rv2309A
(1208 bp).
Intra-MTBC variation
Not interpreted. tRNA loci are multi-copy or repeated, so short-read mapping accumulates artefactual variants here: the numbers below describe the mapping, not the biology of this RNA.
| Genomes surveyed | 145,209 |
| Variable sites | 11 |
| Variants reaching 0.1 % of genomes | 0 |
| Carriers of the most widespread variant | 58 |
Legacy record
metV, tRNA-Met, anticodon cat, length = 74. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007).
Sources
- Descriptive record (locus, name, product, comment, coordinates): Mycobrowser v5, stable RNAs (Kapopoulou et al. 2011, doi:10.1016/j.tube.2010.09.006).
- Intra-MTBC variation and coverage control: computed for this atlas over 145,209 genomes.