MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3923c · 46 genes shown · anchor yidD · open gene page → · ← back to 1 hop

Evidence: Min score 0
rnpA (requalified) — ribonuclease P protein component rnpA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD yidC (requalified) — membrane protein insertase YidC yidC Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD rplC (requalified) — 50S ribosomal protein L3 rplC rplF (requalified) — 50S ribosomal protein L6 rplF rho (requalified) — transcription termination factor Rho rho rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsA (requalified) — 30S ribosomal protein S1 rpsA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rplB (requalified) — 50S ribosomal protein L2 rplB secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv2908c (family_assigned) — RNA-binding protein Rv2908c parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU rpsO (requalified) — 30S ribosomal protein S15 rpsO rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.