MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3922c · 46 genes shown · anchor rnpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
yidD (requalified) — membrane protein insertion efficiency factor YidD yidD rnpA (requalified) — ribonuclease P protein component rnpA yidC (requalified) — membrane protein insertase YidC yidC Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpmH (requalified) — 50S ribosomal protein L34 rpmH rho (requalified) — transcription termination factor Rho rho rplB (requalified) — 50S ribosomal protein L2 rplB rplD (requalified) — 50S ribosomal protein L4 rplD secE1 (requalified) — preprotein translocase SecE secE1 serS (requalified) — serine--tRNA ligase serS parA (requalified) — chromosome partitioning protein ParA parA rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB rpsL (requalified) — 30S ribosomal protein S12 rpsL secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv2908c (family_assigned) — RNA-binding protein Rv2908c rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU rpsO (requalified) — 30S ribosomal protein S15 rpsO rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpmE (requalified) — 50S ribosomal protein L31 rpmE gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplE (requalified) — 50S ribosomal protein L5 rplE rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplX (requalified) — 50S ribosomal protein L24 rplX rpsE (requalified) — 30S ribosomal protein S5 rpsE rplC (requalified) — 50S ribosomal protein L3 rplC rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC nusG (requalified) — transcription termination/antitermination protein nusG rplK (requalified) — 50S ribosomal protein L11 rplK rplA (requalified) — 50S ribosomal protein L1 rplA secA1 (family_assigned) — protein translocase subunit SecA secA1 cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 valS (requalified) — valine--tRNA ligase valS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.