MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3920c · 46 genes shown · anchor yidC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c yidC (requalified) — membrane protein insertase YidC yidC rnpA (requalified) — ribonuclease P protein component rnpA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv2908c (family_assigned) — RNA-binding protein Rv2908c parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB rho (requalified) — transcription termination factor Rho rho rplP (requalified) — 50S ribosomal protein L16 rplP trpA (family_assigned) — tryptophan synthase subunit alpha trpA rplV (requalified) — 50S ribosomal protein L22 rplV rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsS (requalified) — 30S ribosomal protein S19 rpsS secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD rplB (requalified) — 50S ribosomal protein L2 rplB parA (requalified) — chromosome partitioning protein ParA parA engA (requalified) — ribosome biogenesis GTPase Der engA rpsP (requalified) — 30S ribosomal protein S16 rpsP rimM (requalified) — ribosome maturation factor RimM rimM rpsI (requalified) — 30S ribosomal protein S9 rpsI trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD rplS (requalified) — 50S ribosomal protein L19 rplS Rv1708 (requalified) — initiation inhibitor protein Rv1708 Rv3213c (family_assigned) — AAA family ATPase Rv3213c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpmE (requalified) — 50S ribosomal protein L31 rpmE gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC trpB (family_assigned) — tryptophan synthase subunit beta trpB lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt trpE (requalified) — anthranilate synthase component I trpE trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpG (requalified) — anthranilate synthase component II trpG rpsF (requalified) — 30S ribosomal protein S6 rpsF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.