MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3919c · 46 genes shown · anchor parB · open gene page → · ← back to 1 hop

Evidence: Min score 0
gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB parA (requalified) — chromosome partitioning protein ParA parA Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c yidC (requalified) — membrane protein insertase YidC yidC rnpA (requalified) — ribonuclease P protein component rnpA engA (requalified) — ribosome biogenesis GTPase Der engA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD tsnR (requalified) — RNA methyltransferase tsnR era (requalified) — GTPase Era era Rv3916c (requalified) — acetyltransferase Rv3916c rpmH (requalified) — 50S ribosomal protein L34 rpmH Rv2647 (requalified) — hypothetical protein Rv2647 Rv1708 (requalified) — initiation inhibitor protein Rv1708 Rv3213c (family_assigned) — AAA family ATPase Rv3213c Rv2908c (family_assigned) — RNA-binding protein Rv2908c secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA dnaG (requalified) — DNA primase dnaG rho (requalified) — transcription termination factor Rho rho rplB (requalified) — 50S ribosomal protein L2 rplB rplT (requalified) — 50S ribosomal protein L20 rplT rsfS (requalified) — ribosome silencing factor rsfS infC (requalified) — translation initiation factor IF-3 infC rpmI (requalified) — 50S ribosomal protein L35 rpmI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplO (requalified) — 50S ribosomal protein L15 rplO Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2367c (requalified) — endoribonuclease Rv2367c Rv2366c (family_assigned) — hemolysin family protein Rv2366c rpsF (requalified) — 30S ribosomal protein S6 rpsF phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 rpsP (requalified) — 30S ribosomal protein S16 rpsP Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304 Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 rpmA (requalified) — 50S ribosomal protein L27 rpmA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.