MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3913 · 43 genes shown · anchor trxC · open gene page → · ← back to 1 hop

Evidence: Min score 0
trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 trxC (requalified) — thioredoxin trxC trxB1 (requalified) — thioredoxin trxB1 csd (requalified) — cysteine desulfurase csd ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1324 (requalified) — co-chaperone YbbN Rv1324 trxA (family_assigned) — thioredoxin family protein trxA rsmA (requalified) — anti-sigma-M factor RsmA rsmA murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM mutT4 (requalified) — NUDIX hydrolase mutT4 Rv3909 (dark) — hypothetical protein Rv3909 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 echA12 (requalified) — enoyl-CoA hydratase echA12 Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv1473 (family_assigned) — macrolide ABC transporter ATP-binding protein Rv1473 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC sufD (requalified) — Fe-S cluster assembly protein SufD sufD sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 ahpD (requalified) — alkyl hydroperoxide reductase ahpD dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ dsbF (requalified) — protein disulfide oxidoreductase dsbF thiX (family_assigned) — thioredoxin family protein thiX Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c hemD (requalified) — uroporphyrin-III C-methyltransferase hemD fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap Rv1322A (family_assigned) — hypothetical protein Rv1322A ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD htpG (requalified) — molecular chaperone HtpG htpG fhaA (requalified) — cell division-associated protein FhaA fhaA Rv3906c (requalified) — pullulanase Rv3906c Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv0948c (requalified) — chorismate mutase Rv0948c murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c sigC (requalified) — RNA polymerase sigma factor SigC sigC pcnA (requalified) — poly(A) polymerase PcnA pcnA Rv3835 (family_assigned) — septum formation family protein Rv3835

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.