MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3899c · 46 genes shown · anchor eccD2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3899c (family_assigned) — hypothetical protein Rv3899c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c hsr1 (requalified) — hypothetical protein hsr1 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 Rv3896c (requalified) — transglycosylase Rv3896c eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv3901c (dark) — hypothetical protein Rv3901c Rv3898c (dark) — hypothetical protein Rv3898c Rv3897c (dark) — hypothetical protein Rv3897c pks8 (requalified) — polyketide synthase pks8 Rv0945 (requalified) — oxidoreductase Rv0945 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv3162c (family_assigned) — integral membrane protein Rv3162c cobQ1 (requalified) — cobyric acid synthase cobQ1 pirG (requalified) — exported repetitive protein pirG mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c blaC (requalified) — beta-lactamase blaC Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c trpE (requalified) — anthranilate synthase component I trpE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.