MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3896c · 46 genes shown · anchor eccC2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3896c (requalified) — transglycosylase Rv3896c eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c cpsA (family_assigned) — LCP family protein cpsA Rv1057 (family_assigned) — YncE family protein Rv1057 hsr1 (requalified) — hypothetical protein hsr1 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv2632c (family_assigned) — DUF1876 domain-containing protein Rv2632c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0210 (family_assigned) — hypothetical protein Rv0210 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3134c (requalified) — universal stress protein Rv3134c acg (family_assigned) — FMN-binding protein Acg acg Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narK2 (requalified) — nitrate transporter NarK narK2 Rv3787c (requalified) — class I SAM-dependent methyltransferase Rv3787c Rv2812 (family_assigned) — helix-turn-helix domain-containing protein Rv2812 purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c pimE (requalified) — mannosyltransferase pimE PPE2 (family_assigned) — PPE family protein PPE2 PPE2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.