MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3893c · 46 genes shown · anchor PPE69 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE36 (family_assigned) — PE family protein PE36 PE36 PPE69 (family_assigned) — PPE family protein PPE69 PPE69 esxD (family_assigned) — WXG100 family type VII secretion target esxD esxC (family_assigned) — WXG100 family type VII secretion target esxC eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv3896c (requalified) — transglycosylase Rv3896c mpg (requalified) — DNA-3-methyladenine glycosylase mpg PPE63 (family_assigned) — PPE family protein PPE63 PPE63 PE16 (family_assigned) — PE family protein PE16 PE16 PE5 (family_assigned) — PE family protein PE5 PE5 PE35 (family_assigned) — PE family protein PE35 PE35 PE4 (family_assigned) — PE family protein PE4 PE4 lppB (family_assigned) — LppA family lipoprotein lppB espG2 (requalified) — type VII secretion system ESX-2 associated protein espG2 esxG (requalified) — type VII secretion system protein EsxG esxG esxN (requalified) — ESAT-6 like protein EsxN esxN eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c tyrS (requalified) — tyrosine--tRNA ligase tyrS Rv1687c (family_assigned) — ABC transporter ATP-binding protein Rv1687c Rv1686c (family_assigned) — ABC transporter permease Rv1686c Rv1685c (family_assigned) — TetR family transcriptional regulator Rv1685c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv3538 (requalified) — dehydrogenase Rv3538 PE25 (family_assigned) — PE family protein PE25 PE25 lipY (requalified) — triacylglycerol lipase Lip lipY Rv1431 (family_assigned) — DUF3556 domain-containing protein Rv1431 Rv1432 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1432 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1429 (family_assigned) — PucR family transcriptional regulator Rv1429 Rv3005c (family_assigned) — DoxX family protein Rv3005c Rv0024 (family_assigned) — C40 family peptidase Rv0024 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.