MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3890c · 36 genes shown · anchor esxD · open gene page → · ← back to 1 hop

Evidence: Min score 0
esxC (family_assigned) — WXG100 family type VII secretion target esxC esxD (family_assigned) — WXG100 family type VII secretion target esxD espG2 (requalified) — type VII secretion system ESX-2 associated protein espG2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 PPE69 (family_assigned) — PPE family protein PPE69 PPE69 PE36 (family_assigned) — PE family protein PE36 PE36 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 esxG (requalified) — type VII secretion system protein EsxG esxG esxS (requalified) — ESAT-6 like protein EsxS esxS eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 esxN (requalified) — ESAT-6 like protein EsxN esxN eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 PPE63 (family_assigned) — PPE family protein PPE63 PPE63 lppB (family_assigned) — LppA family lipoprotein lppB Rv3896c (requalified) — transglycosylase Rv3896c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv3899c (family_assigned) — hypothetical protein Rv3899c mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 esxH (requalified) — type VII secretion system effector EsxH esxH espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 esxR (family_assigned) — WXG100 family type VII secretion target esxR esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ PPE4 (family_assigned) — PPE family protein PPE4 PPE4 PPE46 (family_assigned) — PPE family protein PPE46 PPE46 esxV (requalified) — ESAT-6 like protein EsxV esxV esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.