MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3849 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
espR (family_assigned) — type VII secretion system ESX-1 transcriptional re espR Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv3647c (family_assigned) — hypothetical protein Rv3647c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c rseA (requalified) — anti-sigma E factor RseA rseA lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c chp1 (requalified) — sulfolipid-1 biosynthesis membrane-anchored acyltr chp1 Rv3527 (family_assigned) — hypothetical protein Rv3527 Rv2049c (family_assigned) — hypothetical protein Rv2049c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3851 (dark) — hypothetical protein Rv3851 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c lpqM (requalified) — neutral zinc metallopeptidase lpqM Rv0431 (requalified) — tuberculin-like peptide Rv0431 cspA (requalified) — cold shock protein CspA cspA topA (requalified) — type I DNA topoisomerase topA ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv3311 (family_assigned) — primosomal protein Rv3311 cei (requalified) — envelope integrity protein Cei cei Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c tatB (requalified) — Sec-independent protein translocase protein TatB tatB sigE (requalified) — RNA polymerase sigma factor SigE sigE htrA (requalified) — serine protease HtrA htrA Rv1083 (dark) — hypothetical protein Rv1083 typA (requalified) — translational GTPase TypA typA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c lprQ (requalified) — L%2CD-transpeptidase LdtMt5 lprQ murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB chp2 (requalified) — diacyltrehalose acyltransferase Chp2 chp2 sap (requalified) — sulfolipid-1 biosynthesis transporter Sap sap papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.