MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3848 · 29 genes shown · anchor espR · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3848 (family_assigned) — TMEM165/GDT1 family protein Rv3848 Rv3847 (requalified) — peptidase Rv3847 espR (family_assigned) — type VII secretion system ESX-1 transcriptional re espR furA (family_assigned) — Fur family transcriptional regulator furA Rv2137c (dark) — hypothetical protein Rv2137c sodA (requalified) — superoxide dismutase sodA Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0822c (family_assigned) — LCP family protein Rv0822c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv3647c (family_assigned) — hypothetical protein Rv3647c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c rseA (requalified) — anti-sigma E factor RseA rseA katG (requalified) — catalase/peroxidase HPI katG Rv1907c (dark) — hypothetical protein Rv1907c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1910c (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein Rv1910c sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2136c (requalified) — undecaprenyl-diphosphate phosphatase Rv2136c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c Rv2134c (dark) — hypothetical protein Rv2134c Rv2133c (family_assigned) — SCO1664 family protein Rv2133c lppL (family_assigned) — hypothetical protein lppL mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.