MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3842c · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
glpQ1 (requalified) — glycerophosphodiester phosphodiesterase glpQ1 Rv2277c (requalified) — glycerolphosphodiesterase Rv2277c glpQ2 (requalified) — glycerophosphodiester phosphodiesterase glpQ2 Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpK (requalified) — glycerol kinase GlpK glpK Rv0178 (requalified) — Mce associated membrane protein Rv0178 omamB (requalified) — hypothetical protein omamB Rv3492c (requalified) — Mce associated protein Rv3492c Rv2390c (family_assigned) — hypothetical protein Rv2390c Rv1362c (family_assigned) — hypothetical protein Rv1362c Rv1363c (dark) — hypothetical protein Rv1363c Rv0318c (family_assigned) — integral membrane protein Rv0318c Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 Rv2252 (requalified) — diacylglycerol kinase Rv2252 Rv2250c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2250c gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 mpa (requalified) — proteasome ATPase mpa mec (requalified) — CysO-cysteine peptidase mec prcB (family_assigned) — proteasome subunit beta prcB prcA (family_assigned) — proteasome subunit alpha prcA Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 omamA (requalified) — hypothetical protein omamA zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mce4D (family_assigned) — virulence factor Mce family protein mce4D lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4F (family_assigned) — virulence factor Mce family protein mce4F

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.