MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3828c · 30 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3828c (requalified) — resolvase Rv3828c Rv3827c (requalified) — transposase Rv3827c Rv2885c (requalified) — transposase Rv2885c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c Rv2979c (family_assigned) — IS607 family transposase Rv2979c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3831 (family_assigned) — DUF2834 domain-containing protein Rv3831 recX (requalified) — recombination regulator RecX recX Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c Rv2886c (requalified) — resolvase Rv2886c thiL (requalified) — thiamine-phosphate kinase thiL fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 ltp1 (requalified) — lipid-transfer protein ltp1 Rv0921 (family_assigned) — IS607-like element IS1535 family transposase Rv0921 phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 recA (requalified) — intein-containing recombinase RecA recA radA (requalified) — DNA repair protein RadA radA Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.