MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3789 · 42 genes shown · anchor dprE1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 embC (requalified) — arabinosyltransferase EmbC embC aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA embA (requalified) — arabinosyltransferase EmbA embA embB (requalified) — arabinosyltransferase EmbB embB Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv2073c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv2073c Rv0531 (family_assigned) — DUF4229 domain-containing protein Rv0531 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL cobK (requalified) — cobalt-precorrin-6A reductase cobK cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM Rv2074 (requalified) — F420-dependent biliverdin reductase Rv2074 Rv3668c (requalified) — protease Rv3668c lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c Rv3437 (dark) — DUF2510 domain-containing protein Rv3437 Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.