MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3788 · 40 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 embC (requalified) — arabinosyltransferase EmbC embC dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA ptrp (family_assigned) — hypothetical protein ptrp Rv1775 (family_assigned) — hypothetical protein Rv1775 whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 sigA (requalified) — RNA polymerase sigma factor sigA sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ embA (requalified) — arabinosyltransferase EmbA embA embB (requalified) — arabinosyltransferase EmbB embB iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR embR (requalified) — response regulator transcription factor EmbR embR Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv1931c (family_assigned) — transcriptional regulator Rv1931c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv2113 (family_assigned) — integral membrane protein Rv2113 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.