MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3787c · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3787c (requalified) — class I SAM-dependent methyltransferase Rv3787c Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 mmaA1 (requalified) — mycolic acid methyltransferase MmaA1 mmaA1 cmaA1 (requalified) — cyclopropane mycolic acid synthase CmaA1 cmaA1 mmaA2 (requalified) — cyclopropane mycolic acid synthase MmaA2 mmaA2 cmaA2 (requalified) — cyclopropane mycolic acid synthase CmaA2 cmaA2 Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 Rv2812 (family_assigned) — helix-turn-helix domain-containing protein Rv2812 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3896c (requalified) — transglycosylase Rv3896c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 hsr1 (requalified) — hypothetical protein hsr1 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R lipG (requalified) — lipase/esterase LipG lipG Rv0647c (family_assigned) — hypothetical protein Rv0647c Rv0449c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0449c fabD2 (requalified) — malonyl CoA-acyl carrier protein transacylase fabD2 Rv0650 (family_assigned) — ROK family protein Rv0650 iunH (requalified) — nucleoside hydrolase IunH iunH Rv0448c (dark) — hypothetical protein Rv0448c pks13 (requalified) — polyketide synthase Pks13 pks13 Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c Rv3254 (requalified) — oxidoreductase Rv3254 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY mmaA3 (requalified) — methoxy mycolic acid synthase MmaA3 mmaA3 mmaA4 (requalified) — hydroxymycolate synthase MmaA4 mmaA4 Rv0504c (family_assigned) — MaoC family dehydratase N-terminal domain-containi Rv0504c serB1 (requalified) — phosphoserine phosphatase SerB serB1 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 fabG1 (requalified) — 3-oxoacyl-ACP reductase FabG1 fabG1 Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv0083 (requalified) — oxidoreductase Rv0083 hycP (family_assigned) — hypothetical protein hycP hycQ (requalified) — hydrogenase HycQ hycQ hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.