MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3782 · 46 genes shown · anchor rfbD · open gene page → · ← back to 1 hop

Evidence: Min score 0
glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 rfbD (family_assigned) — ABC transporter permease rfbD glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 glf (requalified) — UDP-galactopyranose mutase glf bpa (requalified) — proteasome activator protein Bpa bpa Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv3311 (family_assigned) — primosomal protein Rv3311 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv3242c (family_assigned) — ComF family protein Rv3242c xerC (requalified) — tyrosine recombinase XerC xerC rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB lcp1 (requalified) — phosphotransferase Lcp1 lcp1 rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC galE2 (family_assigned) — SDR family oxidoreductase galE2 galE1 (requalified) — UDP-glucose 4-epimerase galE1 Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa prcA (family_assigned) — proteasome subunit alpha prcA mpa (requalified) — proteasome ATPase mpa prcB (family_assigned) — proteasome subunit beta prcB Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA PPE37 (family_assigned) — PPE family protein PPE37 PPE37 pheA (requalified) — prephenate dehydratase pheA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.