MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3779 · 46 genes shown · anchor rfbE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3779 (family_assigned) — DUF6541 family protein Rv3779 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE bpa (requalified) — proteasome activator protein Bpa bpa rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0517 (requalified) — acyltransferase Rv0517 Rv3630 (family_assigned) — hypothetical protein Rv3630 Rv1510 (family_assigned) — hypothetical protein Rv1510 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c papA3 (requalified) — acyltransferase PapA3 papA3 Rv3242c (family_assigned) — ComF family protein Rv3242c xerC (requalified) — tyrosine recombinase XerC xerC prcA (family_assigned) — proteasome subunit alpha prcA mpa (requalified) — proteasome ATPase mpa prcB (family_assigned) — proteasome subunit beta prcB glf (requalified) — UDP-galactopyranose mutase glf pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 Rv3631 (family_assigned) — glycosyltransferase family 2 protein Rv3631 Rv3629c (family_assigned) — DUF475 domain-containing protein Rv3629c Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0188 (requalified) — SPW repeat protein Rv0188 Rv0876c (requalified) — MFS transporter Rv0876c Rv0877 (dark) — DUF3027 domain-containing protein Rv0877 prrB (requalified) — two-component system sensor histidine kinase PrrB prrB Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE Rv0779c (dark) — hypothetical protein Rv0779c Rv3707c (requalified) — hypothetical protein Rv3707c udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 echA21 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA21 rslA (requalified) — anti-sigma-L factor RslA rslA lipE (requalified) — lipase LipE lipE Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 mmpL10 (requalified) — RND transporter MmpL10 mmpL10

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.