MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3756c · 46 genes shown · anchor proV · open gene page → · ← back to 1 hop

Evidence: Min score 0
proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c Rv3760 (family_assigned) — membrane protein Rv3760 lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 Rv0191 (family_assigned) — Rv0191 family MFS efflux transporter Rv0191 fadD30 (requalified) — long-chain-fatty-acid--AMP ligase FadD30 fadD30 Rv1667c (family_assigned) — Probable second part of macrolide-transport ATP-bi Rv1667c Rv3008 (family_assigned) — MgtC/SapB family protein Rv3008 Rv0323c (family_assigned) — PIG-L deacetylase family protein Rv0323c lppM (requalified) — lipoprotein LppM lppM Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 Rv1234 (requalified) — general stress protein Rv1234 mdh (requalified) — malate dehydrogenase mdh accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 Rv0190 (family_assigned) — metal-sensitive transcriptional regulator Rv0190 Rv0192 (family_assigned) — hypothetical protein Rv0192 ilvD (requalified) — dihydroxy-acid dehydratase ilvD pdxH (requalified) — pyridoxamine 5'-phosphate oxidase pdxH pks6 (requalified) — membrane bound polyketide synthase pks6 mbtE (requalified) — peptide synthetase mbtE mbtF (requalified) — peptide synthetase mbtF nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv1668c (family_assigned) — Probable first part of macrolide-transport ATP-bin Rv1668c cyp139 (requalified) — cytochrome P450 cyp139 rplU (requalified) — 50S ribosomal protein L21 rplU rplO (requalified) — 50S ribosomal protein L15 rplO rpsO (requalified) — 30S ribosomal protein S15 rpsO rplM (requalified) — 50S ribosomal protein L13 rplM Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c Rv3007c (family_assigned) — flavin reductase family protein Rv3007c ctpH (requalified) — cation-translocating P-type ATPase ctpH ctpF (requalified) — cation-transporting P-type ATPase ctpF ctpE (requalified) — cation-translocating P-type ATPase ctpE ctpI (requalified) — cation-transporter ATPase I ctpI Rv0326 (family_assigned) — hypothetical protein Rv0326

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.