MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3749c · 45 genes shown · anchor vapB50 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv3750c (requalified) — excisionase Rv3750c Rv2310 (requalified) — excisionase Rv2310 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv2311 (family_assigned) — hypothetical protein Rv2311 Rv2309A (dark) — hypothetical protein Rv2309A Rv2807 (family_assigned) — hypothetical protein Rv2807 Rv2312 (dark) — hypothetical protein Rv2312 Rv0842 (requalified) — MFS transporter Rv0842 Rv0329c (requalified) — class I SAM-dependent methyltransferase Rv0329c Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv2019 (family_assigned) — hypothetical protein Rv2019 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC16 (requalified) — ribonuclease VapC16 vapC16 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 Rv1044 (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv1044 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv0836c (family_assigned) — hypothetical protein Rv0836c relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2023c (dark) — hypothetical protein Rv2023c Rv2020c (family_assigned) — Conserved hypothetical protein Rv2020c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.