MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3746c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE34 (family_assigned) — PE family protein PE34 PE34 Rv3745c (dark) — hypothetical protein Rv3745c Rv3747 (dark) — hypothetical protein Rv3747 PPE68 (family_assigned) — PPE family protein PPE68 PPE68 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 PPE11 (family_assigned) — PPE family protein PPE11 PPE11 PE9 (family_assigned) — PE family protein PE9 PE9 PPE67 (family_assigned) — PPE family protein PPE67 PPE67 PE10 (family_assigned) — PE family protein PE10 PE10 PE_PGRS14 (family_assigned) — PE-PGRS family protein PE_PGRS14 PE_PGRS14 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 PE_PGRS41 (requalified) — acid and phagosome regulated protein AprC PE_PGRS41 Rv0274 (family_assigned) — VOC family protein Rv0274 Rv3748 (family_assigned) — hypothetical protein Rv3748 espE (requalified) — type VII secretion system ESX-1 associated protein espE PE35 (family_assigned) — PE family protein PE35 PE35 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB espJ (requalified) — type VII secretion system ESX-1 associated protein espJ eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 espF (requalified) — type VII secretion system ESX-1 associated protein espF espH (requalified) — type VII secretion system ESX-1 associated protein espH eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 Rv0454 (dark) — Conserved hypothetical protein Rv0454 Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A panC (requalified) — pantoate--beta-alanine ligase panC Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c Rv2205c (requalified) — glycerate kinase Rv2205c ripC (requalified) — peptidoglycan hydrolase RipC ripC PPE66 (family_assigned) — PPE family protein PPE66 PPE66 Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c Rv3741c (requalified) — oxidoreductase Rv3741c Rv3742c (requalified) — oxidoreductase Rv3742c PE25 (family_assigned) — PE family protein PE25 PE25 PE29 (family_assigned) — PE family protein PE29 PE29 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE27A (family_assigned) — PE family protein PE27A PE27A PE_PGRS56 (family_assigned) — PE-PGRS family protein PE_PGRS56 PE_PGRS56 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 mpt53 (requalified) — protein disulfide oxidoreductase mpt53 Rv1929c (family_assigned) — TIGR03085 family metal-binding protein Rv1929c Rv2777c (requalified) — metal-dependent hydrolase Rv2777c Rv2557 (family_assigned) — hypothetical protein Rv2557

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.