MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3744 · 46 genes shown · anchor ctpJ · open gene page → · ← back to 1 hop

Evidence: Min score 0
nmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript nmtR ctpJ (requalified) — heavy metal translocating P-type ATPase ctpJ Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv1359 (family_assigned) — transcriptional regulator Rv1359 ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD zur (requalified) — zinc uptake transcriptional repressor Zur zur Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c kmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript kmtR smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB trxA (family_assigned) — thioredoxin family protein trxA cadI (requalified) — cadmium-induced metalloenzyme CadI cadI Rv3742c (requalified) — oxidoreductase Rv3742c Rv3741c (requalified) — oxidoreductase Rv3741c sodC (family_assigned) — superoxide dismutase family protein sodC Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c mmcO (requalified) — multicopper oxidase MmcO mmcO moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 embR (requalified) — response regulator transcription factor EmbR embR Rv0891c (family_assigned) — hypothetical protein Rv0891c Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv0312 (family_assigned) — Hsp70 family protein Rv0312 spmT (requalified) — sphingomyelinase spmT trxB1 (requalified) — thioredoxin trxB1 echA12 (requalified) — enoyl-CoA hydratase echA12 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sufR (family_assigned) — suf operon transcriptional regulator SufR sufR rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv0083 (requalified) — oxidoreductase Rv0083 hycP (family_assigned) — hypothetical protein hycP hycQ (requalified) — hydrogenase HycQ hycQ hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE Rv2642 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2642 Rv2640c (family_assigned) — Rv2640c family ArsR-like transcriptional regulator Rv2640c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.