MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3731 · 43 genes shown · anchor mku · open gene page → · ← back to 1 hop

Evidence: Min score 0
ligC (requalified) — ATP-dependent DNA ligase ligC ligD (requalified) — non-homologous end-joining DNA ligase ligD Rv0269c (requalified) — DNA polymerase domain-containing protein Rv0269c lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2090 (requalified) — 5'-3' exonuclease Rv2090 mku (requalified) — Ku protein mku polA (requalified) — DNA polymerase I polA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv1278 (family_assigned) — AAA family ATPase Rv1278 dinG (requalified) — ATP-dependent helicase DinG dinG Rv1277 (family_assigned) — hypothetical protein Rv1277 ligB (requalified) — ATP-dependent DNA ligase ligB Rv2828A (dark) — hypothetical protein Rv2828A lhr (requalified) — ATP-dependent helicase lhr Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 Rv0268c (family_assigned) — hypothetical protein Rv0268c fadD2 (requalified) — long-chain-fatty-acid--CoA ligase FadD2 fadD2 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA helZ (requalified) — DEAD/DEAH box helicase helZ dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX recA (requalified) — intein-containing recombinase RecA recA Rv2529 (family_assigned) — hypothetical protein Rv2529 ligD (requalified) — ATP-dependent DNA ligase ligD uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gca (requalified) — GDP-mannose 4%2C6-dehydratase gca def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mutY (requalified) — A/G-specific adenine glycosylase mutY end (requalified) — deoxyribonuclease IV end Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279 topA (requalified) — type I DNA topoisomerase topA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB mec (requalified) — CysO-cysteine peptidase mec

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.