MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3729 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3729 (requalified) — transferase Rv3729 Rv3728 (requalified) — MFS transporter Rv3728 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv0213c (requalified) — methyltransferase Rv0213c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv2541 (dark) — hypothetical protein Rv2541 Rv2012 (family_assigned) — hypothetical protein Rv2012 Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2209 (requalified) — MFS transporter Rv2209 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR ppk2 (requalified) — polyphosphate kinase ppk2 fadD4 (requalified) — fatty-acid--CoA ligase FadD4 fadD4 hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO Rv3224B (family_assigned) — Conserved hypothetical protein Rv3224B Rv3224A (family_assigned) — Conserved hypothetical protein Rv3224A fas (requalified) — fatty acid synthase fas fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 Rv0227c (family_assigned) — membrane protein Rv0227c sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH aroF (requalified) — chorismate synthase aroF aroK (requalified) — shikimate kinase AroK aroK aroB (requalified) — 3-dehydroquinate synthase aroB aroD (requalified) — type II 3-dehydroquinate dehydratase aroD Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.