MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3728 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3728 (requalified) — MFS transporter Rv3728 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c nadE (requalified) — NAD(+) synthase nadE pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv1359 (family_assigned) — transcriptional regulator Rv1359 moeY (family_assigned) — Rv1355c family protein moeY Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c Rv1356c (requalified) — hypothetical protein Rv1356c Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2209 (requalified) — MFS transporter Rv2209 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD cobB (requalified) — NAD-dependent protein deacylase cobB ppnK (requalified) — NAD kinase ppnK sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA nudC (requalified) — NAD(+) diphosphatase nudC fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.